Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:28693350-28893569

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24 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Spaca9 2 28692080 to 28699651 7571 - protein coding gene sperm acrosome associated 9
Tssr16968 2 28698852 to 28698863 11 + TSS region transcription start site region 16968
Cpgi11391 2 28699533 to 28700376 843 CpG island CpG island 11391
Tssr23291 2 28699636 to 28699659 23 - TSS region transcription start site region 23291
Tssr23292 2 28699661 to 28699688 27 - TSS region transcription start site region 23292
Tssr23293 2 28699728 to 28699739 11 - TSS region transcription start site region 23293
Tssr16969 2 28699787 to 28699818 31 + TSS region transcription start site region 16969
Tssr16970 2 28700151 to 28700154 3 + TSS region transcription start site region 16970
Tssr16971 2 28700155 to 28700187 32 + TSS region transcription start site region 16971
Ak8 2 28700164 to 28813165 113001 + protein coding gene adenylate kinase 8
Tssr16972 2 28702667 to 28702698 31 + TSS region transcription start site region 16972
Mir3088 2 28733278 to 28733351 73 + miRNA gene microRNA 3088
Gm13385 2 28793350 to 28793569 219 - pseudogene predicted gene 13385
Gm13386 2 28807708 to 28807831 123 - pseudogene predicted gene 13386
Gtf3c4 2 28822299 to 28840360 18061 - protein coding gene general transcription factor IIIC, polypeptide 4
Cpgi11392 2 28839609 to 28841030 1421 CpG island CpG island 11392
Tssr23294 2 28840258 to 28840269 11 - TSS region transcription start site region 23294
Tssr23295 2 28840274 to 28840358 84 - TSS region transcription start site region 23295
Tssr16973 2 28840406 to 28840462 56 + TSS region transcription start site region 16973
Ddx31 2 28840406 to 28905571 65165 + protein coding gene DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 31
Tssr16974 2 28840471 to 28840482 11 + TSS region transcription start site region 16974
Tssr16975 2 28840604 to 28840653 49 + TSS region transcription start site region 16975
Tssr16976 2 28840682 to 28840752 70 + TSS region transcription start site region 16976
Tssr16977 2 28840765 to 28840778 13 + TSS region transcription start site region 16977