Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:27100643-27230683

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34 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Adamtsl2 2 27079340 to 27108613 29273 + protein coding gene ADAMTS-like 2
Gm36882 2 27100759 to 27102705 1946 - lncRNA gene predicted gene, 36882
Fam163b 2 27110379 to 27142477 32098 - protein coding gene family with sequence similarity 163, member B
Tssr23185 2 27110560 to 27110575 15 - TSS region transcription start site region 23185
Tssr23186 2 27112001 to 27112014 13 - TSS region transcription start site region 23186
Tssr23187 2 27112017 to 27112034 17 - TSS region transcription start site region 23187
Tssr23188 2 27112204 to 27112215 11 - TSS region transcription start site region 23188
Tssr16838 2 27121165 to 27121201 36 + TSS region transcription start site region 16838
Opfaq1 2 27132630 to 9671880 -17460750 QTL open field activity QTL 1
Cfq2 2 27132630 to 56506216 29373586 QTL conditioned fear QTL 2
Cpgi11367 2 27141904 to 27142831 927 CpG island CpG island 11367
Tssr23189 2 27142406 to 27142425 19 - TSS region transcription start site region 23189
Tssr23190 2 27142429 to 27142481 52 - TSS region transcription start site region 23190
Tssr23191 2 27142502 to 27142513 11 - TSS region transcription start site region 23191
Tssr23192 2 27142530 to 27142556 26 - TSS region transcription start site region 23192
Dbhos 2 27144898 to 27162703 17805 - antisense lncRNA gene dopamine beta hydroxylase, opposite strand
Tssr16839 2 27165499 to 27165515 16 + TSS region transcription start site region 16839
Dbh 2 27165507 to 27183204 17697 + protein coding gene dopamine beta hydroxylase
Tssr16840 2 27165520 to 27165531 11 + TSS region transcription start site region 16840
Tssr16841 2 27165563 to 27165570 7 + TSS region transcription start site region 16841
Tssr16842 2 27165643 to 27165683 40 + TSS region transcription start site region 16842
Tssr16843 2 27170529 to 27170546 17 + TSS region transcription start site region 16843
Tssr16844 2 27180979 to 27180983 4 + TSS region transcription start site region 16844
Tssr16845 2 27181568 to 27181587 19 + TSS region transcription start site region 16845
Tssr16846 2 27182137 to 27182148 11 + TSS region transcription start site region 16846
Tssr16847 2 27182210 to 27182232 22 + TSS region transcription start site region 16847
Sardh 2 27188393 to 27248332 59939 - protein coding gene sarcosine dehydrogenase
Sardhos 2 27189382 to 27234710 45328 + antisense lncRNA gene sarcosine dehydrogenase, opposite strand
Tssr23193 2 27189470 to 27189505 35 - TSS region transcription start site region 23193
Tssr23194 2 27205494 to 27205497 3 - TSS region transcription start site region 23194
Tssr23195 2 27209928 to 27209953 25 - TSS region transcription start site region 23195
Tssr23196 2 27215182 to 27215184 2 - TSS region transcription start site region 23196
Tssr23197 2 27225193 to 27225209 16 - TSS region transcription start site region 23197
Tssr16848 2 27229541 to 27229542 1 + TSS region transcription start site region 16848