Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:26616717-26846725

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm20532 2 26586639 to 26635634 48995 + protein coding gene predicted gene 20532
Gm39772 2 26605994 to 26617362 11368 - lncRNA gene predicted gene, 39772
Tssr23150 2 26617451 to 26617459 8 - TSS region transcription start site region 23150
Tssr23151 2 26617462 to 26617473 11 - TSS region transcription start site region 23151
Tssr23152 2 26617477 to 26617483 6 - TSS region transcription start site region 23152
Cpgi11356 2 26628020 to 26629215 1195 CpG island CpG island 11356
Tssr16816 2 26628441 to 26628462 21 + TSS region transcription start site region 16816
Dipk1b 2 26628457 to 26636497 8040 + protein coding gene divergent protein kinase domain 1B
Tssr16817 2 26628465 to 26628550 85 + TSS region transcription start site region 16817
Tssr16818 2 26630504 to 26630528 24 + TSS region transcription start site region 16818
Snhg7 2 26637176 to 26640244 3068 - lncRNA gene small nucleolar RNA host gene 7
Snora43 2 26637847 to 26637985 138 - snoRNA gene small nucleolar RNA, H/ACA box 43
Snora17 2 26639190 to 26639321 131 - snoRNA gene small nucleolar RNA, H/ACA box 17
Cpgi11357 2 26639946 to 26640539 593 CpG island CpG island 11357
Tssr23153 2 26640079 to 26640091 12 - TSS region transcription start site region 23153
Tssr23154 2 26640236 to 26640249 13 - TSS region transcription start site region 23154
Snhg7os 2 26640390 to 26645944 5554 + antisense lncRNA gene small nucleolar RNA host gene 7, opposite strand
Gm2240 2 26648328 to 26652042 3714 + protein coding gene predicted gene 2240
Tssr23155 2 26657219 to 26657241 22 - TSS region transcription start site region 23155
Cpgi11358 2 26662379 to 26662670 291 CpG island CpG island 11358
Lcn4 2 26667674 to 26671282 3608 - protein coding gene lipocalin 4
Tssr23156 2 26668771 to 26668780 9 - TSS region transcription start site region 23156
Tssr23157 2 26668793 to 26668818 25 - TSS region transcription start site region 23157
Tssr23158 2 26671318 to 26671323 5 - TSS region transcription start site region 23158
Gm13359 2 26722390 to 26723081 691 - pseudogene predicted gene 13359
Tssr16819 2 26731717 to 26731725 8 + TSS region transcription start site region 16819
Gm39773 2 26731726 to 26736753 5027 + protein coding gene predicted gene, 39773
Gm39774 2 26782155 to 26787257 5102 - protein coding gene predicted gene, 39774
Abo 2 26842503 to 26864979 22476 - protein coding gene ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase, transferase B, alpha 1-3-galactosyltransferase)