Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:26497417-26605171

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53 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Notch1 2 26457902 to 26503822 45920 - protein coding gene notch 1
Tssr16798 2 26498413 to 26498455 42 + TSS region transcription start site region 16798
Tssr16799 2 26501873 to 26501876 3 + TSS region transcription start site region 16799
Tssr23118 2 26502201 to 26502220 19 - TSS region transcription start site region 23118
Cpgi11352 2 26502210 to 26504601 2391 CpG island CpG island 11352
Tssr23119 2 26502814 to 26502823 9 - TSS region transcription start site region 23119
Tssr23120 2 26503632 to 26503641 9 - TSS region transcription start site region 23120
Tssr23121 2 26503664 to 26503669 5 - TSS region transcription start site region 23121
Tssr23122 2 26503789 to 26503800 11 - TSS region transcription start site region 23122
Tssr23123 2 26503814 to 26503836 22 - TSS region transcription start site region 23123
Gm35978 2 26503927 to 26505347 1420 + lncRNA gene predicted gene, 35978
Tssr23124 2 26505336 to 26505340 4 - TSS region transcription start site region 23124
Tssr16800 2 26516028 to 26516039 11 + TSS region transcription start site region 16800
Tssr23125 2 26516379 to 26516383 4 - TSS region transcription start site region 23125
Cpgi11353 2 26516450 to 26516680 230 CpG island CpG island 11353
Tssr23126 2 26516620 to 26516635 15 - TSS region transcription start site region 23126
Tssr23127 2 26516729 to 26516741 12 - TSS region transcription start site region 23127
Gm36171 2 26547417 to 26555171 7754 - lncRNA gene predicted gene, 36171
Tssr23128 2 26556339 to 26556388 49 - TSS region transcription start site region 23128
Gm13358 2 26558625 to 26559193 568 + pseudogene predicted gene 13358
Tssr16801 2 26576077 to 26576107 30 + TSS region transcription start site region 16801
Tssr16802 2 26581011 to 26581023 12 + TSS region transcription start site region 16802
Tssr16803 2 26581024 to 26581039 15 + TSS region transcription start site region 16803
Tssr16804 2 26581050 to 26581061 11 + TSS region transcription start site region 16804
Egfl7 2 26581056 to 26592682 11626 + protein coding gene EGF-like domain 7
Tssr16805 2 26581066 to 26581069 3 + TSS region transcription start site region 16805
Tssr16806 2 26581077 to 26581093 16 + TSS region transcription start site region 16806
Tssr16807 2 26581122 to 26581135 13 + TSS region transcription start site region 16807
Tssr16808 2 26583858 to 26583874 16 + TSS region transcription start site region 16808
Cpgi11354 2 26586041 to 26587271 1230 CpG island CpG island 11354
Tssr16809 2 26586607 to 26586664 57 + TSS region transcription start site region 16809
Gm20532 2 26586639 to 26635634 48995 + protein coding gene predicted gene 20532
Mir126a 2 26591357 to 26591429 72 + miRNA gene microRNA 126a
Mir126b 2 26591363 to 26591420 57 - miRNA gene microRNA 126b
Tssr16810 2 26591423 to 26591426 3 + TSS region transcription start site region 16810
Tssr23129 2 26592679 to 26592680 1 - TSS region transcription start site region 23129
Agpat2 2 26593057 to 26604417 11360 - protein coding gene 1-acylglycerol-3-phosphate O-acyltransferase 2 (lysophosphatidic acid acyltransferase, beta)
Tssr23130 2 26593420 to 26593431 11 - TSS region transcription start site region 23130
Tssr23131 2 26594933 to 26594945 12 - TSS region transcription start site region 23131
Tssr23132 2 26596364 to 26596378 14 - TSS region transcription start site region 23132
Tssr23133 2 26601638 to 26601645 7 - TSS region transcription start site region 23133
D2Mit417 2 26601731 to 26601853 122 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 417
Tssr23134 2 26601925 to 26601928 3 - TSS region transcription start site region 23134
Tssr23135 2 26602202 to 26602213 11 - TSS region transcription start site region 23135
Cpgi11355 2 26603326 to 26604900 1574 CpG island CpG island 11355
Tssr16811 2 26604059 to 26604074 15 + TSS region transcription start site region 16811
Tssr23136 2 26604163 to 26604174 11 - TSS region transcription start site region 23136
Tssr23137 2 26604200 to 26604227 27 - TSS region transcription start site region 23137
Tssr23138 2 26604235 to 26604252 17 - TSS region transcription start site region 23138
Tssr23139 2 26604267 to 26604309 42 - TSS region transcription start site region 23139
Tssr23140 2 26604398 to 26604430 32 - TSS region transcription start site region 23140
Tssr16812 2 26604504 to 26604506 2 + TSS region transcription start site region 16812
Tssr23141 2 26604581 to 26604625 44 - TSS region transcription start site region 23141