Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:25222227-25262284

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35 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Fam166a 2 25218745 to 25222280 3535 + protein coding gene family with sequence similarity 166, member A
Tubb4b 2 25222160 to 25224702 2542 - protein coding gene tubulin, beta 4B class IVB
Cpgi11300 2 25223768 to 25225274 1506 CpG island CpG island 11300
Tssr22949 2 25224230 to 25224268 38 - TSS region transcription start site region 22949
Tssr22950 2 25224653 to 25224659 6 - TSS region transcription start site region 22950
Tssr16666 2 25225043 to 25225071 28 + TSS region transcription start site region 16666
Tssr16667 2 25225363 to 25225375 12 + TSS region transcription start site region 16667
Tssr16668 2 25225416 to 25225431 15 + TSS region transcription start site region 16668
Tssr22951 2 25228420 to 25228459 39 - TSS region transcription start site region 22951
Slc34a3 2 25228897 to 25234271 5374 - protein coding gene solute carrier family 34 (sodium phosphate), member 3
Tssr22952 2 25234177 to 25234192 15 - TSS region transcription start site region 22952
Tssr22953 2 25234203 to 25234223 20 - TSS region transcription start site region 22953
Tssr22954 2 25234227 to 25234251 24 - TSS region transcription start site region 22954
Rnf224 2 25234476 to 25236787 2311 - protein coding gene ring finger protein 224
Cysrt1 2 25238819 to 25239897 1078 - protein coding gene cysteine rich tail 1
Tssr22955 2 25239850 to 25239870 20 - TSS region transcription start site region 22955
Cpgi11301 2 25240769 to 25241137 368 CpG island CpG island 11301
Tssr16669 2 25241579 to 25241596 17 + TSS region transcription start site region 16669
Cpgi11302 2 25241664 to 25243085 1421 CpG island CpG island 11302
Tssr16670 2 25241903 to 25241926 23 + TSS region transcription start site region 16670
Tssr16671 2 25242196 to 25242207 11 + TSS region transcription start site region 16671
Tssr16672 2 25242227 to 25242284 57 + TSS region transcription start site region 16672
Tssr16673 2 25242285 to 25242379 94 + TSS region transcription start site region 16673
Tssr16674 2 25242397 to 25242408 11 + TSS region transcription start site region 16674
Rnf208 2 25242929 to 25244261 1332 + protein coding gene ring finger protein 208
Tssr16675 2 25243059 to 25243087 28 + TSS region transcription start site region 16675
Tssr16676 2 25243238 to 25243249 11 + TSS region transcription start site region 16676
Ndor1 2 25244813 to 25255443 10630 - protein coding gene NADPH dependent diflavin oxidoreductase 1
Tssr22956 2 25246841 to 25246864 23 - TSS region transcription start site region 22956
Cpgi11303 2 25255080 to 25256081 1001 CpG island CpG island 11303
Tssr22957 2 25255348 to 25255397 49 - TSS region transcription start site region 22957
Tmem203 2 25255439 to 25256292 853 + protein coding gene transmembrane protein 203
Tssr16677 2 25255439 to 25255486 47 + TSS region transcription start site region 16677
Tssr16678 2 25255665 to 25255685 20 + TSS region transcription start site region 16678
Cpgi11304 2 25262263 to 25263942 1679 CpG island CpG island 11304