MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 2:23198095-23522102

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19 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Yme1l1	2	23156369 to 23199260	42891	+	protein coding gene	YME1-like 1 (S. cerevisiae)
Tssr16549	2	23201936 to 23201942	6	+	TSS region	transcription start site region 16549
Gm13423	2	23202033 to 23202910	877	+	pseudogene	predicted gene 13423
Tssr16550	2	23207458 to 23207465	7	+	TSS region	transcription start site region 16550
Tssr16551	2	23207470 to 23207493	23	+	TSS region	transcription start site region 16551
4931423N10Rik	2	23207476 to 23267129	59653	+	protein coding gene	RIKEN cDNA 4931423N10 gene
Cpgi11276	2	23234215 to 23234731	516		CpG island	CpG island 11276
Gm13422	2	23235236 to 23235739	503	+	pseudogene	predicted gene 13422
Tssr426	2	23247283 to 23247285	2	+	TSS region	transcription start site region 426
Tssr16552	2	23259986 to 23259990	4	+	TSS region	transcription start site region 16552
Cpgi11277	2	23321036 to 23321584	548		CpG island	CpG island 11277
Nxph2	2	23321246 to 23401973	80727	+	protein coding gene	neurexophilin 2
Gm34769	2	23353095 to 23367102	14007	-	lncRNA gene	predicted gene, 34769
A330106F07Rik	2	23492927 to 23494447	1520		unclassified gene	RIKEN cDNA A330106F07 gene
Gm38309	2	23492931 to 23494448	1517	+	unclassified gene	predicted gene, 38309
Tssr22893	2	23496396 to 23496400	4	-	TSS region	transcription start site region 22893
Spopl	2	23506220 to 23572106	65886	-	protein coding gene	speckle-type POZ protein-like
Gm13331	2	23508860 to 23509307	447	+	pseudogene	predicted gene 13331
Tssr22894	2	23521985 to 23522000	15	-	TSS region	transcription start site region 22894