Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:22860836-23060856

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38 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Apbb1ip 2 22774094 to 22875653 101559 + protein coding gene amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein
Tssr16520 2 22869377 to 22869381 4 + TSS region transcription start site region 16520
Tssr16521 2 22874840 to 22874852 12 + TSS region transcription start site region 16521
Tssr22871 2 22874980 to 22875004 24 - TSS region transcription start site region 22871
Tssr22872 2 22875028 to 22875048 20 - TSS region transcription start site region 22872
Cpgi11272 2 22895218 to 22896204 986 CpG island CpG island 11272
A130006I12Rik 2 22895321 to 22895736 415 - pseudogene RIKEN cDNA A130006I12 gene
Tssr16522 2 22895482 to 22895485 3 + TSS region transcription start site region 16522
Tssr22873 2 22895498 to 22895559 61 - TSS region transcription start site region 22873
Pdss1 2 22895522 to 22940266 44744 + protein coding gene prenyl (solanesyl) diphosphate synthase, subunit 1
Tssr16523 2 22895559 to 22895568 9 + TSS region transcription start site region 16523
Tssr16524 2 22895583 to 22895629 46 + TSS region transcription start site region 16524
Gm25544 2 22902388 to 22902507 119 + snoRNA gene predicted gene, 25544
Gm14441 2 22913293 to 22913832 539 - pseudogene predicted gene 14441
Tssr22874 2 22913876 to 22913883 7 - TSS region transcription start site region 22874
Tssr16525 2 22914663 to 22914682 19 + TSS region transcription start site region 16525
Tssr16526 2 22928557 to 22928562 5 + TSS region transcription start site region 16526
Abi1 2 22940073 to 23040241 100168 - protein coding gene abl-interactor 1
Tssr22875 2 22941899 to 22941949 50 - TSS region transcription start site region 22875
Tssr22876 2 22950688 to 22950707 19 - TSS region transcription start site region 22876
Tssr22877 2 22953534 to 22953567 33 - TSS region transcription start site region 22877
Tssr22878 2 22960836 to 22960856 20 - TSS region transcription start site region 22878
Tssr16527 2 22971116 to 22971137 21 + TSS region transcription start site region 16527
Tssr22879 2 22987548 to 22987589 41 - TSS region transcription start site region 22879
Tssr22880 2 22988202 to 22988203 1 - TSS region transcription start site region 22880
Tssr22881 2 22988809 to 22988819 10 - TSS region transcription start site region 22881
Tssr22882 2 22989240 to 22989260 20 - TSS region transcription start site region 22882
2210402A03Rik 2 22991493 to 22993451 1958 unclassified gene RIKEN cDNA 2210402A03 gene
Gm13357 2 23019131 to 23019667 536 - pseudogene predicted gene 13357
Tssr22883 2 23021626 to 23021629 3 - TSS region transcription start site region 22883
Tssr22884 2 23026086 to 23026093 7 - TSS region transcription start site region 22884
Tssr22885 2 23034989 to 23034994 5 - TSS region transcription start site region 22885
Tssr22886 2 23036145 to 23036159 14 - TSS region transcription start site region 22886
Tssr16528 2 23039290 to 23039324 34 + TSS region transcription start site region 16528
Cpgi11273 2 23039308 to 23040227 919 CpG island CpG island 11273
Tssr22887 2 23040092 to 23040127 35 - TSS region transcription start site region 22887
Tssr22888 2 23040138 to 23040174 36 - TSS region transcription start site region 22888
Tssr22889 2 23040177 to 23040201 24 - TSS region transcription start site region 22889