Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:21017567-22180544

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39 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr22848 2 21024160 to 21024166 6 - TSS region transcription start site region 22848
Gm13377 2 21044809 to 21139682 94873 - pseudogene predicted gene 13377
Gm13376 2 21097099 to 21120659 23560 + lincRNA gene predicted gene 13376
C130046B21Rik 2 21140917 to 21144205 3288 unclassified gene RIKEN cDNA C130046B21 gene
Cpgi11261 2 21141635 to 21142461 826 CpG island CpG island 11261
D2Mit69 2 21150234 to 21150411 177 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 69
Gm25368 2 21171083 to 21171213 130 + rRNA gene predicted gene, 25368
Tssr420 2 21178907 to 21178909 2 + TSS region transcription start site region 420
Enkur 2 21180731 to 21205365 24634 - protein coding gene enkurin, TRPC channel interacting protein
Gm23007 2 21197690 to 21197866 176 - unclassified non-coding RNA gene predicted gene, 23007
Tssr22849 2 21205310 to 21205324 14 - TSS region transcription start site region 22849
Tssr22850 2 21205342 to 21205371 29 - TSS region transcription start site region 22850
Tssr22851 2 21205375 to 21205384 9 - TSS region transcription start site region 22851
Cpgi11262 2 21205542 to 21206119 577 CpG island CpG island 11262
Tssr22852 2 21205630 to 21205639 9 - TSS region transcription start site region 22852
Tssr22853 2 21205643 to 21205677 34 - TSS region transcription start site region 22853
Tssr16466 2 21205719 to 21205781 62 + TSS region transcription start site region 16466
Thnsl1 2 21205724 to 21215009 9285 + protein coding gene threonine synthase-like 1 (bacterial)
Gm13378 2 21244105 to 21244440 335 + pseudogene predicted gene 13378
Tssr16467 2 21306894 to 21306896 2 + TSS region transcription start site region 16467
Gm13327 2 21341925 to 21369111 27186 - antisense lncRNA gene predicted gene 13327
Cpgi11263 2 21367336 to 21368105 769 CpG island CpG island 11263
Tssr16468 2 21367532 to 21367540 8 + TSS region transcription start site region 16468
Tssr16469 2 21367547 to 21367548 1 + TSS region transcription start site region 16469
Tssr16470 2 21367567 to 21367596 29 + TSS region transcription start site region 16470
Gpr158 2 21367567 to 21830544 462977 + protein coding gene G protein-coupled receptor 158
Tssr16471 2 21367598 to 21367617 19 + TSS region transcription start site region 16471
Tssr16472 2 21367821 to 21367870 49 + TSS region transcription start site region 16472
Cpgi11264 2 21368382 to 21369231 849 CpG island CpG island 11264
Gm13379 2 21442909 to 21443529 620 - pseudogene predicted gene 13379
Tssr421 2 21501863 to 21501871 8 + TSS region transcription start site region 421
Tssr16473 2 21509083 to 21509085 2 + TSS region transcription start site region 16473
Tssr16474 2 21650436 to 21650439 3 + TSS region transcription start site region 16474
Gm24886 2 21794933 to 21795055 122 - snoRNA gene predicted gene, 24886
Gm39766 2 21795101 to 21817155 22054 - lncRNA gene predicted gene, 39766
Gm39767 2 21878833 to 21964167 85334 - lncRNA gene predicted gene, 39767
Tssr422 2 21986194 to 21986195 1 + TSS region transcription start site region 422
D2Mit79 2 22013043 to 22013252 209 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 79
Gm13337 2 22067826 to 22069419 1593 + pseudogene predicted gene 13337