Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:181196727-181237799

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23 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ptk6 2 181195124 to 181203630 8506 - protein coding gene PTK6 protein tyrosine kinase 6
Tssr28183 2 181197035 to 181197062 27 - TSS region transcription start site region 28183
Tssr22294 2 181201177 to 181201179 2 + TSS region transcription start site region 22294
Tssr28184 2 181202507 to 181202534 27 - TSS region transcription start site region 28184
Tssr28185 2 181202536 to 181202563 27 - TSS region transcription start site region 28185
Srms 2 181205563 to 181213171 7608 - protein coding gene src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites
Gm40033 2 181206632 to 181210969 4337 + lncRNA gene predicted gene, 40033
Cpgi12917 2 181212343 to 181213314 971 CpG island CpG island 12917
Tssr22295 2 181212586 to 181212603 17 + TSS region transcription start site region 22295
Tssr28186 2 181213122 to 181213133 11 - TSS region transcription start site region 28186
Gm14398 2 181216727 to 181217799 1072 + pseudogene predicted gene 14398
2310035O12Rik 2 181218503 to 181218834 331 unclassified gene RIKEN cDNA 2310035O12 gene
Cpgi12918 2 181219757 to 181220133 376 CpG island CpG island 12918
Tssr22296 2 181219998 to 181220055 57 + TSS region transcription start site region 22296
Fndc11 2 181220013 to 181222854 2841 + protein coding gene fibronectin type III domain containing 11
Helz2 2 181227615 to 181242027 14412 - protein coding gene helicase with zinc finger 2, transcriptional coactivator
Tssr28187 2 181227955 to 181227972 17 - TSS region transcription start site region 28187
Tssr28188 2 181228021 to 181228032 11 - TSS region transcription start site region 28188
Tssr28189 2 181228343 to 181228354 11 - TSS region transcription start site region 28189
Tssr28190 2 181234082 to 181234128 46 - TSS region transcription start site region 28190
Tssr28191 2 181236119 to 181236130 11 - TSS region transcription start site region 28191
Tssr28192 2 181236229 to 181236243 14 - TSS region transcription start site region 28192
Tssr28193 2 181237566 to 181237579 13 - TSS region transcription start site region 28193