Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:180609353-180709743

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28 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Col9a3 2 180598102 to 180622185 24083 + protein coding gene collagen, type IX, alpha 3
Tssr807 2 180621796 to 180621803 7 - TSS region transcription start site region 807
Tcfl5 2 180621956 to 180642702 20746 - protein coding gene transcription factor-like 5 (basic helix-loop-helix)
Tssr22259 2 180635090 to 180635121 31 + TSS region transcription start site region 22259
Cpgi12901 2 180641656 to 180643141 1485 CpG island CpG island 12901
Tssr28115 2 180642279 to 180642288 9 - TSS region transcription start site region 28115
Tssr28116 2 180642306 to 180642315 9 - TSS region transcription start site region 28116
Tssr28117 2 180642317 to 180642335 18 - TSS region transcription start site region 28117
Gm30345 2 180642428 to 180665994 23566 + lncRNA gene predicted gene, 30345
Tssr28118 2 180642602 to 180642625 23 - TSS region transcription start site region 28118
Tssr28119 2 180642626 to 180642639 13 - TSS region transcription start site region 28119
Tssr28120 2 180642651 to 180642664 13 - TSS region transcription start site region 28120
Tssr28121 2 180642681 to 180642757 76 - TSS region transcription start site region 28121
Dido1 2 180657964 to 180709999 52035 - protein coding gene death inducer-obliterator 1
Cpgi12902 2 180659353 to 180659743 390 CpG island CpG island 12902
Tssr28122 2 180682632 to 180682636 4 - TSS region transcription start site region 28122
Tssr28123 2 180692854 to 180692873 19 - TSS region transcription start site region 28123
Gm22502 2 180698063 to 180698169 106 + snRNA gene predicted gene, 22502
Tssr28124 2 180701152 to 180701167 15 - TSS region transcription start site region 28124
C130092D22Rik 2 180701239 to 180707162 5923 unclassified non-coding RNA gene RIKEN cDNA C130092D22 gene
Cpgi12903 2 180701405 to 180702463 1058 CpG island CpG island 12903
Tssr28125 2 180701997 to 180702046 49 - TSS region transcription start site region 28125
Tssr28126 2 180702047 to 180702115 68 - TSS region transcription start site region 28126
Tssr28127 2 180709040 to 180709074 34 - TSS region transcription start site region 28127
Tssr28128 2 180709080 to 180709101 21 - TSS region transcription start site region 28128
Tssr28129 2 180709119 to 180709149 30 - TSS region transcription start site region 28129
Tssr22260 2 180709308 to 180709320 12 + TSS region transcription start site region 22260
Cpgi12904 2 180709456 to 180710946 1490 CpG island CpG island 12904