MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 2:180253374-180293414

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Cpgi12889	2	180256601 to 180257947	1346		CpG island	CpG island 12889
Tssr28086	2	180257105 to 180257118	13	-	TSS region	transcription start site region 28086
Tssr28087	2	180257119 to 180257162	43	-	TSS region	transcription start site region 28087
Tssr22216	2	180257373 to 180257396	23	+	TSS region	transcription start site region 22216
Rps21	2	180257377 to 180258445	1068	+	protein coding gene	ribosomal protein S21
Tssr22217	2	180257405 to 180257428	23	+	TSS region	transcription start site region 22217
Mir3091	2	180257536 to 180257611	75	+	miRNA gene	microRNA 3091
Cables2	2	180258539 to 180273490	14951	-	protein coding gene	CDK5 and Abl enzyme substrate 2
Tssr28088	2	180262580 to 180262595	15	-	TSS region	transcription start site region 28088
Cpgi12890	2	180272647 to 180274247	1600		CpG island	CpG island 12890
Tssr28089	2	180273374 to 180273414	40	-	TSS region	transcription start site region 28089
Tssr28090	2	180273443 to 180273478	35	-	TSS region	transcription start site region 28090
Tssr28091	2	180273488 to 180273502	14	-	TSS region	transcription start site region 28091
Tssr28092	2	180276852 to 180276872	20	-	TSS region	transcription start site region 28092
Rbbp8nl	2	180277646 to 180289879	12233	-	protein coding gene	RBBP8 N-terminal like
Gm29943	2	180290695 to 180312765	22070	+	lncRNA gene	predicted gene, 29943
Tssr22218	2	180290713 to 180290731	18	+	TSS region	transcription start site region 22218
Tssr22219	2	180290737 to 180290750	13	+	TSS region	transcription start site region 22219