Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:155418181-155737810

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66 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ncoa6 2 155390656 to 155473894 83238 - protein coding gene nuclear receptor coactivator 6
Gm17959 2 155427284 to 155427923 639 - pseudogene predicted gene, 17959
Tssr26989 2 155443079 to 155443081 2 - TSS region transcription start site region 26989
Tssr26990 2 155451062 to 155451068 6 - TSS region transcription start site region 26990
Gm14239 2 155459501 to 155460892 1391 - pseudogene predicted gene 14239
D030059C06Rik 2 155461073 to 155466828 5755 unclassified gene RIKEN cDNA D030059C06 gene
Cpgi12519 2 155472919 to 155474174 1255 CpG island CpG island 12519
Tssr26991 2 155473740 to 155473751 11 - TSS region transcription start site region 26991
Tssr26992 2 155473788 to 155473835 47 - TSS region transcription start site region 26992
Gm14238 2 155486047 to 155486369 322 - pseudogene predicted gene 14238
Ggt7 2 155490379 to 155514858 24479 - protein coding gene gamma-glutamyltransferase 7
Tssr26993 2 155495582 to 155495584 2 - TSS region transcription start site region 26993
Tssr26994 2 155499120 to 155499128 8 - TSS region transcription start site region 26994
Cpgi12520 2 155506344 to 155506637 293 CpG island CpG island 12520
Cpgi12521 2 155514528 to 155515039 511 CpG island CpG island 12521
Tssr26995 2 155514796 to 155514860 64 - TSS region transcription start site region 26995
Cpgi12522 2 155517505 to 155518748 1243 CpG island CpG island 12522
Tssr21102 2 155517684 to 155517714 30 + TSS region transcription start site region 21102
Acss2 2 155517953 to 155562746 44793 + protein coding gene acyl-CoA synthetase short-chain family member 2
Tssr21103 2 155518026 to 155518088 62 + TSS region transcription start site region 21103
Tssr21104 2 155518096 to 155518097 1 + TSS region transcription start site region 21104
Mipep-ps 2 155542647 to 155542937 290 + pseudogene mitochondrial intermediate peptidase, pseudogene
Gm20637 2 155546385 to 155546846 461 + pseudogene predicted gene 20637
Acss2os 2 155547040 to 155556930 9890 - antisense lncRNA gene acyl-CoA synthetase short-chain family member 2, opposite strand
Tssr26996 2 155553084 to 155553090 6 - TSS region transcription start site region 26996
Tssr21105 2 155561105 to 155561128 23 + TSS region transcription start site region 21105
Gss 2 155563181 to 155592810 29629 - protein coding gene glutathione synthetase
Tssr21106 2 155567323 to 155567326 3 + TSS region transcription start site region 21106
Tssr21107 2 155568105 to 155568126 21 + TSS region transcription start site region 21107
Tssr21108 2 155568174 to 155568179 5 + TSS region transcription start site region 21108
Tssr26997 2 155582656 to 155582668 12 - TSS region transcription start site region 26997
Gssos2 2 155591131 to 155592851 1720 + antisense lncRNA gene glutathione synthase, opposite strand 2
Cpgi12523 2 155592267 to 155593070 803 CpG island CpG island 12523
Gssos1 2 155592319 to 155594955 2636 + antisense lncRNA gene glutathione synthase, opposite strand 1
Tssr26998 2 155592708 to 155592770 62 - TSS region transcription start site region 26998
Gm14257 2 155593565 to 155594475 910 - antisense lncRNA gene predicted gene 14257
D2Mit494 2 155607805 to 155607920 115 DNA segment DNA Segment, Chr 2 Massachusetts Institute of Technology 494
Tssr21109 2 155611175 to 155611216 41 + TSS region transcription start site region 21109
Tssr21110 2 155611238 to 155611247 9 + TSS region transcription start site region 21110
Myh7b 2 155611243 to 155634307 23064 + protein coding gene myosin, heavy chain 7B, cardiac muscle, beta
Cpgi12524 2 155613315 to 155613660 345 CpG island CpG island 12524
Cpgi12525 2 155620877 to 155621080 203 CpG island CpG island 12525
Mir499 2 155622880 to 155622958 78 + miRNA gene microRNA 499
Cpgi12526 2 155628964 to 155629899 935 CpG island CpG island 12526
Tssr21111 2 155629366 to 155629385 19 + TSS region transcription start site region 21111
Cpgi12527 2 155630333 to 155630840 507 CpG island CpG island 12527
Trpc4ap 2 155634277 to 155692384 58107 - protein coding gene transient receptor potential cation channel, subfamily C, member 4 associated protein
Tssr26999 2 155640641 to 155640669 28 - TSS region transcription start site region 26999
Tssr27000 2 155640712 to 155640723 11 - TSS region transcription start site region 27000
Tssr27001 2 155640742 to 155640756 14 - TSS region transcription start site region 27001
D2Mit451 2 155649655 to 155649770 115 DNA segment DNA Segment, Chr 2, Massachusetts Institute of Technology 451
D2Dcr110 2 155649660 to 155649774 114 DNA segment DNA Segment, Chr 2, Derry C. Roopenian 110
Tssr27002 2 155651824 to 155651829 5 - TSS region transcription start site region 27002
Tssr27003 2 155652801 to 155652805 4 - TSS region transcription start site region 27003
Gm22334 2 155652892 to 155653024 132 - snoRNA gene predicted gene, 22334
Tssr27004 2 155653535 to 155653554 19 - TSS region transcription start site region 27004
Tssr27005 2 155668443 to 155668447 4 - TSS region transcription start site region 27005
Tssr21112 2 155679820 to 155679823 3 + TSS region transcription start site region 21112
Cpgi12528 2 155691709 to 155692568 859 CpG island CpG island 12528
Tssr27006 2 155692317 to 155692339 22 - TSS region transcription start site region 27006
Tssr27007 2 155692355 to 155692364 9 - TSS region transcription start site region 27007
Tssr27008 2 155692376 to 155692387 11 - TSS region transcription start site region 27008
Edem2 2 155701677 to 155729475 27798 - protein coding gene ER degradation enhancer, mannosidase alpha-like 2
Cpgi12529 2 155728889 to 155729572 683 CpG island CpG island 12529
Tssr27009 2 155729359 to 155729443 84 - TSS region transcription start site region 27009
Gm17581 2 155735810 to 155735866 56 - protein coding gene predicted gene, 17581