MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 2:154378739-154478768

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Snta1	2	154376314 to 154408084	31770	-	protein coding gene	syntrophin, acidic 1
Cpgi12496	2	154380999 to 154381166	167		CpG island	CpG island 12496
Cpgi12497	2	154407265 to 154408550	1285		CpG island	CpG island 12497
Tssr26942	2	154407980 to 154408003	23	-	TSS region	transcription start site region 26942
Tssr26943	2	154408035 to 154408071	36	-	TSS region	transcription start site region 26943
Tssr26944	2	154408078 to 154408116	38	-	TSS region	transcription start site region 26944
Tssr26945	2	154416463 to 154416466	3	-	TSS region	transcription start site region 26945
Gm39962	2	154416499 to 154421329	4830	-	lncRNA gene	predicted gene, 39962
Tssr26946	2	154421262 to 154421276	14	-	TSS region	transcription start site region 26946
Tssr26947	2	154421308 to 154421320	12	-	TSS region	transcription start site region 26947
Tssr21012	2	154427035 to 154427046	11	+	TSS region	transcription start site region 21012
Tssr21013	2	154427071 to 154427089	18	+	TSS region	transcription start site region 21013
Tssr21014	2	154428739 to 154428768	29	+	TSS region	transcription start site region 21014
Cpgi12498	2	154436042 to 154437167	1125		CpG island	CpG island 12498
Tssr21015	2	154436437 to 154436497	60	+	TSS region	transcription start site region 21015
Cbfa2t2	2	154436481 to 154539356	102875	+	protein coding gene	CBFA2/RUNX1 translocation partner 2
Tssr21016	2	154449493 to 154449496	3	+	TSS region	transcription start site region 21016
Tssr21017	2	154472277 to 154472279	2	+	TSS region	transcription start site region 21017