Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:153683053-153833081

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21 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Dnmt3b 2 153649450 to 153687730 38280 + protein coding gene DNA methyltransferase 3B
Tssr20911 2 153686620 to 153686635 15 + TSS region transcription start site region 20911
Tssr703 2 153686907 to 153686929 22 + TSS region transcription start site region 703
Gm17897 2 153703199 to 153704046 847 - pseudogene predicted gene, 17897
Dnmt3c 2 153706484 to 153730013 23529 + protein coding gene DNA methyltransferase 3C
Cpgi12493 2 153740855 to 153742076 1221 CpG island CpG island 12493
Tssr20912 2 153741278 to 153741294 16 + TSS region transcription start site region 20912
Mapre1 2 153741287 to 153773317 32030 + protein coding gene microtubule-associated protein, RP/EB family, member 1
Tssr20913 2 153741318 to 153741327 9 + TSS region transcription start site region 20913
Tssr20914 2 153741334 to 153741375 41 + TSS region transcription start site region 20914
Tssr20915 2 153758053 to 153758081 28 + TSS region transcription start site region 20915
Cpgi12494 2 153779010 to 153779354 344 CpG island CpG island 12494
Tssr20916 2 153779227 to 153779235 8 + TSS region transcription start site region 20916
Tssr20917 2 153779240 to 153779251 11 + TSS region transcription start site region 20917
Tssr20918 2 153779268 to 153779279 11 + TSS region transcription start site region 20918
Efcab8 2 153780879 to 153795182 14303 + protein coding gene EF-hand calcium binding domain 8
Gm38434 2 153804688 to 153844752 40064 + protein coding gene predicted gene, 38434
Tssr20919 2 153805015 to 153805019 4 + TSS region transcription start site region 20919
Tssr20920 2 153826050 to 153826065 15 + TSS region transcription start site region 20920
Tssr20921 2 153826081 to 153826086 5 + TSS region transcription start site region 20921
Gm14494 2 153826171 to 153826605 434 + pseudogene predicted gene 14494