Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:153241058-153341833

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22 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Plagl2 2 153227769 to 153241358 13589 - protein coding gene pleiomorphic adenoma gene-like 2
Cpgi12482 2 153240827 to 153241892 1065 CpG island CpG island 12482
Tssr26895 2 153241343 to 153241354 11 - TSS region transcription start site region 26895
Tssr26896 2 153241358 to 153241394 36 - TSS region transcription start site region 26896
Tssr26897 2 153241402 to 153241411 9 - TSS region transcription start site region 26897
Tssr20882 2 153241452 to 153241466 14 + TSS region transcription start site region 20882
Tssr26898 2 153241497 to 153241500 3 - TSS region transcription start site region 26898
Tssr20883 2 153241502 to 153241603 101 + TSS region transcription start site region 20883
Pofut1 2 153241533 to 153270247 28714 + protein coding gene protein O-fucosyltransferase 1
Tssr20884 2 153241607 to 153241618 11 + TSS region transcription start site region 20884
Tssr26899 2 153241709 to 153241724 15 - TSS region transcription start site region 26899
Tssr20885 2 153278657 to 153278695 38 + TSS region transcription start site region 20885
Tssr20886 2 153278720 to 153278725 5 + TSS region transcription start site region 20886
Tssr20887 2 153278859 to 153278870 11 + TSS region transcription start site region 20887
Gm39961 2 153283852 to 153291302 7450 - lncRNA gene predicted gene, 39961
Cpgi12483 2 153287452 to 153287622 170 CpG island CpG island 12483
Cpgi12484 2 153291058 to 153291833 775 CpG island CpG island 12484
Tssr20888 2 153291404 to 153291459 55 + TSS region transcription start site region 20888
Kif3b 2 153291413 to 153333390 41977 + protein coding gene kinesin family member 3B
Tssr20889 2 153308605 to 153308655 50 + TSS region transcription start site region 20889
Tssr20890 2 153336403 to 153336421 18 + TSS region transcription start site region 20890
2500004C02Rik 2 153341157 to 153345810 4653 - lncRNA gene RIKEN cDNA 2500004C02 gene