Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:152856539-153207950

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90 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tpx2 2 152847964 to 152895321 47357 + protein coding gene TPX2, microtubule-associated
D2Dcr107 2 152857288 to 152857446 158 DNA segment DNA Segment, Chr 2, Derry C. Roopenian 107
Chlq13 2 152857301 to 152857441 140 QTL circulating hormone level QTL 13
Bwq9 2 152857301 to 152857441 140 QTL body weight QTL 9
D2Mit285 2 152857301 to 152857441 140 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 285
Gnf5 2 152857301 to 152857441 140 QTL growth and fatness 5
Gnf2 2 152857301 to 162355165 9497864 QTL growth and fatness 2
Gnf3 2 152857301 to 169276004 16418703 QTL growth and fatness 3
Rends 2 152857301 to 152857441 140 QTL renal disease susceptibility
Mir5622 2 152865067 to 152865126 59 + miRNA gene microRNA 5622
Tssr20842 2 152867242 to 152867264 22 + TSS region transcription start site region 20842
Tssr20843 2 152869452 to 152869461 9 + TSS region transcription start site region 20843
Tssr20844 2 152869542 to 152869553 11 + TSS region transcription start site region 20844
Tssr20845 2 152876545 to 152876582 37 + TSS region transcription start site region 20845
Tssr20846 2 152876594 to 152876608 14 + TSS region transcription start site region 20846
Tssr20847 2 152905007 to 152905010 3 + TSS region transcription start site region 20847
Tssr695 2 152907855 to 152907859 4 + TSS region transcription start site region 695
Tssr20848 2 152911311 to 152911366 55 + TSS region transcription start site region 20848
Mylk2 2 152911352 to 152923068 11716 + protein coding gene myosin, light polypeptide kinase 2, skeletal muscle
Tssr20849 2 152911376 to 152911377 1 + TSS region transcription start site region 20849
Tssr20850 2 152911385 to 152911396 11 + TSS region transcription start site region 20850
Tssr696 2 152911646 to 152911681 35 + TSS region transcription start site region 696
Tssr20851 2 152911763 to 152911769 6 + TSS region transcription start site region 20851
Foxs1 2 152931898 to 152933208 1310 - protein coding gene forkhead box S1
Tssr20852 2 152931938 to 152931945 7 + TSS region transcription start site region 20852
Cpgi12469 2 152932419 to 152933053 634 CpG island CpG island 12469
Tssr26874 2 152933165 to 152933189 24 - TSS region transcription start site region 26874
Tssr26875 2 152933202 to 152933218 16 - TSS region transcription start site region 26875
Dusp15 2 152940997 to 152951698 10701 - protein coding gene dual specificity phosphatase-like 15
Cpgi12470 2 152942645 to 152943822 1177 CpG island CpG island 12470
Cpgi12471 2 152951178 to 152952126 948 CpG island CpG island 12471
Tssr26876 2 152951527 to 152951540 13 - TSS region transcription start site region 26876
Tssr26877 2 152951547 to 152951608 61 - TSS region transcription start site region 26877
Tssr26878 2 152951662 to 152951675 13 - TSS region transcription start site region 26878
Tssr26879 2 152951688 to 152951700 12 - TSS region transcription start site region 26879
Cpgi12472 2 152962282 to 152962884 602 CpG island CpG island 12472
Tssr20853 2 152962457 to 152962469 12 + TSS region transcription start site region 20853
Ttll9 2 152962485 to 153008482 45997 + protein coding gene tubulin tyrosine ligase-like family, member 9
Tssr20854 2 152962486 to 152962510 24 + TSS region transcription start site region 20854
Tssr20855 2 152962521 to 152962528 7 + TSS region transcription start site region 20855
Tssr20856 2 152967935 to 152967952 17 + TSS region transcription start site region 20856
Tssr20857 2 152988629 to 152988632 3 + TSS region transcription start site region 20857
Gm14199 2 152990017 to 152991631 1614 - antisense lncRNA gene predicted gene 14199
Pdrg1 2 153008890 to 153015383 6493 - protein coding gene p53 and DNA damage regulated 1
Tssr20858 2 153014585 to 153014627 42 + TSS region transcription start site region 20858
Cpgi12473 2 153014822 to 153015604 782 CpG island CpG island 12473
Tssr26880 2 153015331 to 153015398 67 - TSS region transcription start site region 26880
Cpgi12474 2 153031539 to 153032950 1411 CpG island CpG island 12474
Xkr7 2 153031852 to 153055775 23923 + protein coding gene X-linked Kx blood group related 7
Tssr20859 2 153031985 to 153032014 29 + TSS region transcription start site region 20859
Gm32286 2 153041344 to 153052799 11455 - lncRNA gene predicted gene, 32286
D2Mit284 2 153047016 to 153047212 196 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 284
D2Mit284.4 2 153047198 to 153047307 109 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 284.4
Tssr20860 2 153051760 to 153051783 23 + TSS region transcription start site region 20860
Cpgi12475 2 153052439 to 153053071 632 CpG island CpG island 12475
Ccm2l 2 153065955 to 153081735 15780 + protein coding gene cerebral cavernous malformation 2-like
Tssr20861 2 153065988 to 153065999 11 + TSS region transcription start site region 20861
Tssr20862 2 153069213 to 153069225 12 + TSS region transcription start site region 20862
Cpgi12476 2 153070770 to 153071125 355 CpG island CpG island 12476
Cpgi12477 2 153071312 to 153072723 1411 CpG island CpG island 12477
Cpgi12478 2 153080841 to 153081266 425 CpG island CpG island 12478
Tssr26881 2 153090640 to 153090661 21 - TSS region transcription start site region 26881
Tssr20863 2 153107656 to 153107673 17 + TSS region transcription start site region 20863
Tssr20864 2 153107702 to 153107709 7 + TSS region transcription start site region 20864
Cpgi12479 2 153108445 to 153109152 707 CpG island CpG island 12479
Hck 2 153108468 to 153151441 42973 + protein coding gene hemopoietic cell kinase
Tssr20865 2 153108474 to 153108484 10 + TSS region transcription start site region 20865
Tssr20866 2 153108489 to 153108542 53 + TSS region transcription start site region 20866
Tssr26882 2 153109018 to 153109022 4 - TSS region transcription start site region 26882
Tssr20867 2 153114476 to 153114506 30 + TSS region transcription start site region 20867
Tssr20868 2 153117608 to 153117630 22 + TSS region transcription start site region 20868
Tssr20869 2 153120363 to 153120398 35 + TSS region transcription start site region 20869
Tssr20870 2 153125503 to 153125535 32 + TSS region transcription start site region 20870
Tssr20871 2 153136565 to 153136568 3 + TSS region transcription start site region 20871
Tssr20872 2 153147483 to 153147492 9 + TSS region transcription start site region 20872
Gm25643 2 153155013 to 153155115 102 + snRNA gene predicted gene, 25643
Tssr20873 2 153161292 to 153161307 15 + TSS region transcription start site region 20873
Tm9sf4 2 153161303 to 153210466 49163 + protein coding gene transmembrane 9 superfamily protein member 4
Tssr20874 2 153161321 to 153161339 18 + TSS region transcription start site region 20874
Cpgi12480 2 153161401 to 153162066 665 CpG island CpG island 12480
Tssr26883 2 153161460 to 153161471 11 - TSS region transcription start site region 26883
Tssr20875 2 153161524 to 153161553 29 + TSS region transcription start site region 20875
Tssr20876 2 153161928 to 153161956 28 + TSS region transcription start site region 20876
Tssr20877 2 153161958 to 153161976 18 + TSS region transcription start site region 20877
D2Mit450 2 153180362 to 153180506 144 DNA segment DNA Segment, Chr 2, Massachusetts Institute of Technology 450
Tssr26884 2 153182472 to 153182492 20 - TSS region transcription start site region 26884
Tssr26885 2 153191486 to 153191497 11 - TSS region transcription start site region 26885
Tssr26886 2 153191521 to 153191536 15 - TSS region transcription start site region 26886
Tssr20878 2 153191794 to 153191808 14 + TSS region transcription start site region 20878
Gm20094 2 153196733 to 153196988 255 - pseudogene predicted gene, 20094