Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:152397920-152427925

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22 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Sox12 2 152393611 to 152398046 4435 - protein coding gene SRY (sex determining region Y)-box 12
Cpgi12448 2 152396303 to 152399366 3063 CpG island CpG island 12448
Tssr26813 2 152397998 to 152398020 22 - TSS region transcription start site region 26813
Tssr26814 2 152398026 to 152398041 15 - TSS region transcription start site region 26814
Tssr26815 2 152398047 to 152398076 29 - TSS region transcription start site region 26815
Tssr26816 2 152398116 to 152398136 20 - TSS region transcription start site region 26816
Tssr26817 2 152398145 to 152398197 52 - TSS region transcription start site region 26817
Cpgi12449 2 152405859 to 152406454 595 CpG island CpG island 12449
Zcchc3 2 152411955 to 152415027 3072 - protein coding gene zinc finger, CCHC domain containing 3
Tssr26818 2 152412920 to 152412925 5 - TSS region transcription start site region 26818
Tssr26819 2 152413268 to 152413311 43 - TSS region transcription start site region 26819
Tssr26820 2 152413486 to 152413489 3 - TSS region transcription start site region 26820
Cpgi12450 2 152413577 to 152415176 1599 CpG island CpG island 12450
Tssr20791 2 152413685 to 152413698 13 + TSS region transcription start site region 20791
Tssr26821 2 152414739 to 152414755 16 - TSS region transcription start site region 26821
Tssr26822 2 152414772 to 152414809 37 - TSS region transcription start site region 26822
Tssr26823 2 152414818 to 152414834 16 - TSS region transcription start site region 26823
Tssr26824 2 152414839 to 152414861 22 - TSS region transcription start site region 26824
6820408C15Rik 2 152415587 to 152444330 28743 + protein coding gene RIKEN cDNA 6820408C15 gene
Gm27343 2 152417262 to 152417324 62 + snRNA gene predicted gene, 27343
Tssr20792 2 152427612 to 152427638 26 + TSS region transcription start site region 20792
Tssr20793 2 152427639 to 152427699 60 + TSS region transcription start site region 20793