Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:148866687-149847405

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52 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr20679 2 148871717 to 148871732 15 + TSS region transcription start site region 20679
Cst3 2 148871722 to 148875512 3790 - protein coding gene cystatin C
Tssr26682 2 148871951 to 148871960 9 - TSS region transcription start site region 26682
Tssr20680 2 148871959 to 148871994 35 + TSS region transcription start site region 20680
Tssr26683 2 148871992 to 148872010 18 - TSS region transcription start site region 26683
Tssr26684 2 148872020 to 148872047 27 - TSS region transcription start site region 26684
Tssr20681 2 148872851 to 148872891 40 + TSS region transcription start site region 20681
Tssr26685 2 148872871 to 148872906 35 - TSS region transcription start site region 26685
Tssr26686 2 148872924 to 148872939 15 - TSS region transcription start site region 26686
Tssr26687 2 148873043 to 148873070 27 - TSS region transcription start site region 26687
Cpgi12403 2 148874764 to 148875613 849 CpG island CpG island 12403
Tssr20682 2 148875148 to 148875171 23 + TSS region transcription start site region 20682
Tssr20683 2 148875224 to 148875256 32 + TSS region transcription start site region 20683
Tssr26688 2 148875421 to 148875444 23 - TSS region transcription start site region 26688
Tssr26689 2 148875452 to 148875488 36 - TSS region transcription start site region 26689
Tssr26690 2 148875604 to 148875616 12 - TSS region transcription start site region 26690
Tssr26691 2 148875623 to 148875641 18 - TSS region transcription start site region 26691
Gm38221 2 148889924 to 148890288 364 - unclassified gene predicted gene, 38221
D2Mit406 2 148896175 to 148896321 146 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 406
Gm14129 2 148927735 to 148931707 3972 - pseudogene predicted gene 14129
Gm1330 2 148990343 to 149003251 12908 - protein coding gene predicted gene 1330
Tssr26692 2 149003302 to 149003324 22 - TSS region transcription start site region 26692
Gm9425 2 149015024 to 149016354 1330 + pseudogene predicted gene 9425
Gm10750 2 149015732 to 149017237 1505 - protein coding gene predicted gene 10750
Tssr20684 2 149085559 to 149085562 3 + TSS region transcription start site region 20684
Tssr26693 2 149092384 to 149092394 10 - TSS region transcription start site region 26693
Tssr26694 2 149092417 to 149092426 9 - TSS region transcription start site region 26694
D2Mit260 2 149182239 to 149182410 171 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 260
Bts1 2 149182239 to 149182410 171 QTL bladder tumor susceptibility 1
Tssr20685 2 149257011 to 149257029 18 + TSS region transcription start site region 20685
Gm14135 2 149257277 to 149262145 4868 + lincRNA gene predicted gene 14135
Tssr20686 2 149283603 to 149283607 4 + TSS region transcription start site region 20686
Gm14132 2 149333077 to 149334789 1712 - pseudogene predicted gene 14132
Gm14131 2 149356687 to 149357405 718 + pseudogene predicted gene 14131
Tssr20687 2 149405010 to 149405028 18 + TSS region transcription start site region 20687
Cst10 2 149405249 to 149410278 5029 + protein coding gene cystatin 10 (chondrocytes)
Tssr20688 2 149405305 to 149405312 7 + TSS region transcription start site region 20688
Tssr20689 2 149405315 to 149405332 17 + TSS region transcription start site region 20689
D2Mit408 2 149494735 to 149494844 109 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 408
Gm24551 2 149566194 to 149566285 91 - snoRNA gene predicted gene, 24551
D2Mit110 2 149585526 to 149585631 105 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 110
Gm14130 2 149743175 to 149744161 986 + pseudogene predicted gene 14130
Gm14133 2 149743927 to 149798743 54816 - lincRNA gene predicted gene 14133
Tssr26695 2 149798716 to 149798729 13 - TSS region transcription start site region 26695
Tssr26696 2 149798807 to 149798824 17 - TSS region transcription start site region 26696
Cpgi12404 2 149830294 to 149831712 1418 CpG island CpG island 12404
C530025M09Rik 2 149830524 to 149831213 689 - protein coding gene RIKEN cDNA C530025M09 gene
Syndig1 2 149830783 to 150004392 173609 + protein coding gene synapse differentiation inducing 1
Tssr20690 2 149830789 to 149830807 18 + TSS region transcription start site region 20690
Tssr20691 2 149830813 to 149830831 18 + TSS region transcription start site region 20691
Tssr20692 2 149830840 to 149830879 39 + TSS region transcription start site region 20692
Tssr20693 2 149830894 to 149830907 13 + TSS region transcription start site region 20693