Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:148282866-148783014

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86 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
nmf62 2 128781466 to 148620946 19839480 heritable phenotypic marker neuroscience mutagenesis facility, 62
D2Mit57 2 148302385 to 148302497 112 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 57
Tssr26645 2 148349382 to 148349393 11 - TSS region transcription start site region 26645
Gm39957 2 148376330 to 148391907 15577 - lncRNA gene predicted gene, 39957
Cpgi12396 2 148394963 to 148396440 1477 CpG island CpG island 12396
Tssr20639 2 148395338 to 148395356 18 + TSS region transcription start site region 20639
Tssr20640 2 148395369 to 148395413 44 + TSS region transcription start site region 20640
Sstr4 2 148395377 to 148396764 1387 + protein coding gene somatostatin receptor 4
Tssr20641 2 148395853 to 148395882 29 + TSS region transcription start site region 20641
Tssr26646 2 148395866 to 148395894 28 - TSS region transcription start site region 26646
Tssr26647 2 148397021 to 148397036 15 - TSS region transcription start site region 26647
Tssr686 2 148397477 to 148397480 3 + TSS region transcription start site region 686
Tssr20642 2 148397488 to 148397493 5 + TSS region transcription start site region 20642
Tssr20643 2 148397529 to 148397538 9 + TSS region transcription start site region 20643
Tssr687 2 148397559 to 148397565 6 + TSS region transcription start site region 687
Tssr26648 2 148403939 to 148403942 3 - TSS region transcription start site region 26648
Thbd 2 148404471 to 148408188 3717 - protein coding gene thrombomodulin
Tssr26649 2 148405504 to 148405507 3 - TSS region transcription start site region 26649
Cpgi12397 2 148406115 to 148408460 2345 CpG island CpG island 12397
Tssr26650 2 148408106 to 148408127 21 - TSS region transcription start site region 26650
Tssr26651 2 148408146 to 148408155 9 - TSS region transcription start site region 26651
D2Mit1006 2 148409245 to 148409452 207 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 1006
Gm14119 2 148419032 to 148419266 234 - pseudogene predicted gene 14119
4833411I10Rik 2 148428221 to 148431014 2793 unclassified gene RIKEN cDNA 4833411I10 gene
Tssr26652 2 148436074 to 148436096 22 - TSS region transcription start site region 26652
Cd93 2 148436651 to 148443535 6884 - protein coding gene CD93 antigen
Tssr26653 2 148437023 to 148437070 47 - TSS region transcription start site region 26653
Tssr26654 2 148437204 to 148437218 14 - TSS region transcription start site region 26654
Tssr26655 2 148438256 to 148438275 19 - TSS region transcription start site region 26655
Tssr26656 2 148438396 to 148438414 18 - TSS region transcription start site region 26656
Tssr26657 2 148438440 to 148438453 13 - TSS region transcription start site region 26657
Tssr26658 2 148439800 to 148439814 14 - TSS region transcription start site region 26658
Tssr26659 2 148439880 to 148439900 20 - TSS region transcription start site region 26659
Tssr20644 2 148440151 to 148440153 2 + TSS region transcription start site region 20644
Tssr26660 2 148440893 to 148440914 21 - TSS region transcription start site region 26660
Tssr26661 2 148441771 to 148441829 58 - TSS region transcription start site region 26661
Cpgi12398 2 148442440 to 148442621 181 CpG island CpG island 12398
Tssr26662 2 148443429 to 148443444 15 - TSS region transcription start site region 26662
Tssr26663 2 148443509 to 148443520 11 - TSS region transcription start site region 26663
Tssr26664 2 148443530 to 148443542 12 - TSS region transcription start site region 26664
Tssr26665 2 148443543 to 148443582 39 - TSS region transcription start site region 26665
Tssr26666 2 148443624 to 148443626 2 - TSS region transcription start site region 26666
D2Mit519 2 148456561 to 148456679 118 DNA segment DNA Segment, Chr 2, Massachusetts Institute of Technology-519
Gm14120 2 148468890 to 148478780 9890 + lincRNA gene predicted gene 14120
Tssr20645 2 148499986 to 148499990 4 + TSS region transcription start site region 20645
Gm46770 2 148520638 to 148562141 41503 - lncRNA gene predicted gene, 46770
Tssr688 2 148522374 to 148522375 1 + TSS region transcription start site region 688
Tssr20646 2 148522557 to 148522586 29 + TSS region transcription start site region 20646
D2Mit281 2 148532866 to 148533014 148 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 281
T2dm2sa 2 148533014 to 29417935 -119115079 QTL type 2 diabetes mellitus 2 in SMXA RI mice
D2Mit407 2 148620831 to 148620946 115 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 407
Gm25866 2 148624711 to 148624822 111 + snoRNA gene predicted gene, 25866
Cpgi12399 2 148672381 to 148673068 687 CpG island CpG island 12399
Nxt1 2 148672615 to 148676026 3411 + protein coding gene NTF2-related export protein 1
Tssr20647 2 148672634 to 148672722 88 + TSS region transcription start site region 20647
Cpgi12400 2 148677759 to 148678170 411 CpG island CpG island 12400
D2Mit405 2 148680172 to 148680255 83 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 405
Plast2b 2 148680255 to 84182854 -64497401 QTL plasma plant sterol 2b
Gm46771 2 148680278 to 148680915 637 - lncRNA gene predicted gene, 46771
Cpgi12401 2 148680747 to 148681713 966 CpG island CpG island 12401
Gzf1 2 148681023 to 148692949 11926 + protein coding gene GDNF-inducible zinc finger protein 1
Tssr20648 2 148681134 to 148681150 16 + TSS region transcription start site region 20648
Tssr20649 2 148681154 to 148681197 43 + TSS region transcription start site region 20649
Tssr20650 2 148681199 to 148681218 19 + TSS region transcription start site region 20650
Napb 2 148693985 to 148732420 38435 - protein coding gene N-ethylmaleimide sensitive fusion protein attachment protein beta
D2Mit47.2 2 148696595 to 148696714 119 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 47.2
D2Mit47 2 148696671 to 148696828 157 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 47
D2Mit47.1 2 148696787 to 148696903 116 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 47.1
Tssr26667 2 148696996 to 148697007 11 - TSS region transcription start site region 26667
Tssr26668 2 148701172 to 148701183 11 - TSS region transcription start site region 26668
Tssr26669 2 148701205 to 148701216 11 - TSS region transcription start site region 26669
Tssr20651 2 148713740 to 148713747 7 + TSS region transcription start site region 20651
Cpgi12402 2 148731590 to 148732602 1012 CpG island CpG island 12402
Tssr26670 2 148732368 to 148732372 4 - TSS region transcription start site region 26670
Tssr26671 2 148732378 to 148732455 77 - TSS region transcription start site region 26671
Tssr26672 2 148732457 to 148732463 6 - TSS region transcription start site region 26672
Tssr20652 2 148750352 to 148750376 24 + TSS region transcription start site region 20652
Cstl1 2 148750361 to 148755378 5017 + protein coding gene cystatin-like 1
Cst11 2 148768618 to 148771497 2879 - protein coding gene cystatin 11
Tssr26673 2 148771401 to 148771435 34 - TSS region transcription start site region 26673
Tssr26674 2 148771451 to 148771468 17 - TSS region transcription start site region 26674
Tssr26675 2 148771489 to 148771503 14 - TSS region transcription start site region 26675
Tssr26676 2 148771556 to 148771569 13 - TSS region transcription start site region 26676
Cstdc1 2 148782009 to 148785936 3927 + protein coding gene cystatin domain containing 1
Tssr20653 2 148782050 to 148782072 22 + TSS region transcription start site region 20653
Tssr20654 2 148782086 to 148782108 22 + TSS region transcription start site region 20654