Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:131514211-131854329

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Smox 2 131491784 to 131525183 33399 + protein coding gene spermine oxidase
Tssr20274 2 131514531 to 131514551 20 + TSS region transcription start site region 20274
Tssr20275 2 131514860 to 131514865 5 + TSS region transcription start site region 20275
Cpgi12293 2 131520519 to 131521165 646 CpG island CpG island 12293
Gm30732 2 131527212 to 131530344 3132 + protein coding gene predicted gene, 30732
Gm39938 2 131537662 to 131561060 23398 + lncRNA gene predicted gene, 39938
Tssr20276 2 131538503 to 131538511 8 + TSS region transcription start site region 20276
Cpgi12294 2 131545781 to 131546759 978 CpG island CpG island 12294
Adra1d 2 131545850 to 131562283 16433 - protein coding gene adrenergic receptor, alpha 1d
Cpgi12295 2 131561032 to 131563141 2109 CpG island CpG island 12295
Tssr20277 2 131561605 to 131561619 14 + TSS region transcription start site region 20277
Gm14285 2 131561614 to 131563179 1565 + antisense lncRNA gene predicted gene 14285
Tssr20278 2 131561638 to 131561651 13 + TSS region transcription start site region 20278
Tssr26401 2 131562488 to 131562502 14 - TSS region transcription start site region 26401
Tssr26402 2 131562515 to 131562535 20 - TSS region transcription start site region 26402
Tssr26403 2 131562755 to 131562773 18 - TSS region transcription start site region 26403
D2Mit77 2 131602630 to 131602799 169 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 77
Gm14280 2 131652897 to 131721838 68941 - antisense lncRNA gene predicted gene 14280
D2Dcr74 2 131684204 to 131684312 108 DNA segment DNA Segment, Chr 2, Derry C. Roopenian 74
D2Mit525 2 131684211 to 131684329 118 DNA segment DNA Segment, Chr 2, Massachusetts Institute of Technology 525
Gm30986 2 131740342 to 131749227 8885 + lncRNA gene predicted gene, 30986
Tssr657 2 131807222 to 131807223 1 + TSS region transcription start site region 657
5330413P13Rik 2 131820006 to 131847656 27650 - lincRNA gene RIKEN cDNA 5330413P13 gene
Tssr20279 2 131843122 to 131843138 16 + TSS region transcription start site region 20279
Gm14282 2 131845356 to 131845595 239 - pseudogene predicted gene 14282
Gm14281 2 131846405 to 131847674 1269 + pseudogene predicted gene 14281
Tssr26404 2 131847607 to 131847678 71 - TSS region transcription start site region 26404
Erv3 2 131853678 to 131859747 6069 - protein coding gene endogenous retroviral sequence 3
Tssr26405 2 131853703 to 131853753 50 - TSS region transcription start site region 26405