Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:127339524-127549572

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40 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Astl 2 127338639 to 127357651 19012 + protein coding gene astacin-like metalloendopeptidase (M12 family)
Tssr20013 2 127357162 to 127357165 3 + TSS region transcription start site region 20013
Cpgi12220 2 127362572 to 127364179 1607 CpG island CpG island 12220
Tssr20014 2 127362811 to 127362818 7 + TSS region transcription start site region 20014
Tssr20015 2 127363169 to 127363193 24 + TSS region transcription start site region 20015
Tssr20016 2 127363197 to 127363217 20 + TSS region transcription start site region 20016
Tssr20017 2 127363224 to 127363242 18 + TSS region transcription start site region 20017
Tssr20018 2 127363260 to 127363271 11 + TSS region transcription start site region 20018
Adra2b 2 127363286 to 127367221 3935 + protein coding gene adrenergic receptor, alpha 2b
Tssr20019 2 127365362 to 127365366 4 + TSS region transcription start site region 20019
Gm39923 2 127380976 to 127390611 9635 + lncRNA gene predicted gene, 39923
Cpgi12221 2 127425004 to 127425331 327 CpG island CpG island 12221
Tssr20020 2 127425155 to 127425194 39 + TSS region transcription start site region 20020
Gpat2 2 127425199 to 127436092 10893 + protein coding gene glycerol-3-phosphate acyltransferase 2, mitochondrial
Gm39924 2 127428054 to 127435068 7014 - lncRNA gene predicted gene, 39924
Fahd2a 2 127436215 to 127444565 8350 - protein coding gene fumarylacetoacetate hydrolase domain containing 2A
Cpgi12222 2 127444203 to 127444753 550 CpG island CpG island 12222
Tssr26118 2 127444524 to 127444572 48 - TSS region transcription start site region 26118
Kcnip3 2 127456498 to 127522094 65596 - protein coding gene Kv channel interacting protein 3, calsenilin
Tssr26119 2 127458210 to 127458232 22 - TSS region transcription start site region 26119
Tssr26120 2 127458307 to 127458332 25 - TSS region transcription start site region 26120
Tssr20021 2 127462990 to 127462994 4 + TSS region transcription start site region 20021
Gm22613 2 127473017 to 127473308 291 - unclassified non-coding RNA gene predicted gene, 22613
Cpgi12223 2 127481745 to 127483422 1677 CpG island CpG island 12223
Tssr26121 2 127482541 to 127482577 36 - TSS region transcription start site region 26121
Tssr20022 2 127483627 to 127483633 6 + TSS region transcription start site region 20022
Cpgi12224 2 127484282 to 127484752 470 CpG island CpG island 12224
Tssr26122 2 127511109 to 127511120 11 - TSS region transcription start site region 26122
Tssr26123 2 127511135 to 127511140 5 - TSS region transcription start site region 26123
Tssr20023 2 127514743 to 127514756 13 + TSS region transcription start site region 20023
Tssr26124 2 127521273 to 127521282 9 - TSS region transcription start site region 26124
Tssr26125 2 127521306 to 127521322 16 - TSS region transcription start site region 26125
Tssr26126 2 127521331 to 127521357 26 - TSS region transcription start site region 26126
Tssr26127 2 127521358 to 127521375 17 - TSS region transcription start site region 26127
Gm35478 2 127521561 to 127531815 10254 + lncRNA gene predicted gene, 35478
Prom2 2 127526953 to 127541417 14464 - protein coding gene prominin 2
Tssr26128 2 127538980 to 127538999 19 - TSS region transcription start site region 26128
Cpgi12225 2 127541061 to 127541620 559 CpG island CpG island 12225
Tssr26129 2 127541389 to 127541405 16 - TSS region transcription start site region 26129
Tssr26130 2 127541412 to 127541454 42 - TSS region transcription start site region 26130