Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:120324093-120484101

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37 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Vps39 2 120316461 to 120353137 36676 - protein coding gene VPS39 HOPS complex subunit
Tssr25851 2 120328449 to 120328458 9 - TSS region transcription start site region 25851
Tssr25852 2 120328681 to 120328698 17 - TSS region transcription start site region 25852
Tssr25853 2 120352022 to 120352030 8 - TSS region transcription start site region 25853
Cpgi12139 2 120352630 to 120353218 588 CpG island CpG island 12139
Tssr25854 2 120352972 to 120352983 11 - TSS region transcription start site region 25854
Tssr25855 2 120352985 to 120352996 11 - TSS region transcription start site region 25855
Tssr25856 2 120352999 to 120353021 22 - TSS region transcription start site region 25856
Tssr25857 2 120353094 to 120353143 49 - TSS region transcription start site region 25857
Tmem87a 2 120355312 to 120404113 48801 - protein coding gene transmembrane protein 87A
Tssr25858 2 120355488 to 120355491 3 - TSS region transcription start site region 25858
Tssr25859 2 120368792 to 120368795 3 - TSS region transcription start site region 25859
D2Dcr27 2 120380999 to 120381277 278 DNA segment DNA segment, Chr 2, Derry C. Roopenian 27
Cpgi12140 2 120403723 to 120404443 720 CpG island CpG island 12140
Ganc 2 120403896 to 120460866 56970 + protein coding gene glucosidase, alpha; neutral C
Tssr25860 2 120404058 to 120404092 34 - TSS region transcription start site region 25860
Tssr25861 2 120404093 to 120404101 8 - TSS region transcription start site region 25861
Tssr25862 2 120404103 to 120404115 12 - TSS region transcription start site region 25862
Tssr19684 2 120404167 to 120404257 90 + TSS region transcription start site region 19684
Tssr25863 2 120404607 to 120404653 46 - TSS region transcription start site region 25863
Tssr25864 2 120404688 to 120404703 15 - TSS region transcription start site region 25864
Tssr19685 2 120404716 to 120404746 30 + TSS region transcription start site region 19685
Tssr19686 2 120404757 to 120404785 28 + TSS region transcription start site region 19686
Tssr19687 2 120404787 to 120404831 44 + TSS region transcription start site region 19687
Tssr19688 2 120406104 to 120406120 16 + TSS region transcription start site region 19688
Tssr19689 2 120411485 to 120411490 5 + TSS region transcription start site region 19689
Tssr19690 2 120450732 to 120450743 11 + TSS region transcription start site region 19690
Tssr19691 2 120450888 to 120450917 29 + TSS region transcription start site region 19691
4931402G19Rik 2 120455698 to 120469367 13669 - lncRNA gene RIKEN cDNA 4931402G19 gene
Tssr19692 2 120461014 to 120461025 11 + TSS region transcription start site region 19692
Tssr19693 2 120463566 to 120463594 28 + TSS region transcription start site region 19693
Capn3 2 120463593 to 120504919 41326 + protein coding gene calpain 3
Tssr19694 2 120476850 to 120476851 1 + TSS region transcription start site region 19694
Tssr19695 2 120476901 to 120476904 3 + TSS region transcription start site region 19695
Tssr19696 2 120476911 to 120476924 13 + TSS region transcription start site region 19696
Tssr619 2 120480292 to 120480307 15 + TSS region transcription start site region 619
Tssr19697 2 120481949 to 120481975 26 + TSS region transcription start site region 19697