MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 2:10077117-10117131

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17 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Atp5c1	2	10056030 to 10080518	24488	-	protein coding gene	ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1
Cpgi11190	2	10079913 to 10081017	1104		CpG island	CpG island 11190
Tssr22586	2	10080154 to 10080166	12	-	TSS region	transcription start site region 22586
Tssr16075	2	10080182 to 10080186	4	+	TSS region	transcription start site region 16075
Tssr22587	2	10080405 to 10080446	41	-	TSS region	transcription start site region 22587
Tssr401	2	10080488 to 10080499	11	-	TSS region	transcription start site region 401
Tssr16076	2	10080575 to 10080595	20	+	TSS region	transcription start site region 16076
Kin	2	10080599 to 10092701	12102	+	protein coding gene	Kin17 DNA and RNA binding protein
Tssr16077	2	10080600 to 10080618	18	+	TSS region	transcription start site region 16077
Itih2	2	10094591 to 10130683	36092	-	protein coding gene	inter-alpha trypsin inhibitor, heavy chain 2
Tssr22588	2	10094823 to 10094828	5	-	TSS region	transcription start site region 22588
Tssr22589	2	10097117 to 10097131	14	-	TSS region	transcription start site region 22589
Tssr22590	2	10098005 to 10098023	18	-	TSS region	transcription start site region 22590
Tssr22591	2	10102815 to 10102822	7	-	TSS region	transcription start site region 22591
Tssr22592	2	10105169 to 10105182	13	-	TSS region	transcription start site region 22592
D2Mit4	2	10108439 to 10108628	189		DNA segment	DNA segment, Chr 2, Massachusetts Institute of Technology 4
Tssr22593	2	10116723 to 10116735	12	-	TSS region	transcription start site region 22593