Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:9980039-10050055

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55 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr154997 19 9980546 to 9980564 18 + TSS region transcription start site region 154997
Tssr154998 19 9980576 to 9980606 30 + TSS region transcription start site region 154998
Tssr154999 19 9980639 to 9980650 11 + TSS region transcription start site region 154999
Tssr155000 19 9980682 to 9980697 15 + TSS region transcription start site region 155000
Tssr155001 19 9980707 to 9980716 9 + TSS region transcription start site region 155001
Tssr155002 19 9980858 to 9980867 9 + TSS region transcription start site region 155002
Cpgi10595 19 9982047 to 9983385 1338 CpG island CpG island 10595
Tssr158131 19 9982425 to 9982435 10 - TSS region transcription start site region 158131
Tssr158132 19 9982441 to 9982449 8 - TSS region transcription start site region 158132
Tssr158133 19 9982484 to 9982506 22 - TSS region transcription start site region 158133
Tssr158134 19 9982512 to 9982531 19 - TSS region transcription start site region 158134
Tssr158135 19 9982546 to 9982567 21 - TSS region transcription start site region 158135
Tssr155003 19 9982694 to 9982711 17 + TSS region transcription start site region 155003
Fth1 19 9982703 to 9985092 2389 + protein coding gene ferritin heavy polypeptide 1
Tssr155004 19 9982848 to 9982852 4 + TSS region transcription start site region 155004
Tssr158136 19 9982891 to 9982940 49 - TSS region transcription start site region 158136
Tssr155005 19 9983088 to 9983118 30 + TSS region transcription start site region 155005
Tssr155006 19 9984178 to 9984219 41 + TSS region transcription start site region 155006
Tssr158137 19 9984219 to 9984237 18 - TSS region transcription start site region 158137
Tssr155007 19 9984247 to 9984292 45 + TSS region transcription start site region 155007
Tssr158138 19 9984265 to 9984326 61 - TSS region transcription start site region 158138
Tssr155008 19 9984557 to 9984583 26 + TSS region transcription start site region 155008
Tssr158139 19 9984585 to 9984619 34 - TSS region transcription start site region 158139
Tssr158140 19 9984806 to 9984840 34 - TSS region transcription start site region 158140
Tssr158141 19 9984857 to 9984868 11 - TSS region transcription start site region 158141
Tssr158142 19 9984873 to 9984893 20 - TSS region transcription start site region 158142
Tssr155009 19 9984903 to 9984929 26 + TSS region transcription start site region 155009
Tssr158143 19 9984932 to 9984959 27 - TSS region transcription start site region 158143
Tssr158144 19 9985089 to 9985097 8 - TSS region transcription start site region 158144
Tssr155010 19 9985093 to 9985117 24 + TSS region transcription start site region 155010
Tssr155011 19 9991589 to 9991590 1 + TSS region transcription start site region 155011
Cpgi10596 19 9992751 to 9993316 565 CpG island CpG island 10596
Tssr158145 19 9992956 to 9992993 37 - TSS region transcription start site region 158145
Tssr158146 19 10001561 to 10001582 21 - TSS region transcription start site region 158146
Tssr158147 19 10001585 to 10001622 37 - TSS region transcription start site region 158147
Tssr158148 19 10001625 to 10001632 7 - TSS region transcription start site region 158148
Best1 19 10001633 to 9985174 -16459 - protein coding gene bestrophin 1
Rab3il1 19 10001674 to 10038380 36706 + protein coding gene RAB3A interacting protein (rabin3)-like 1
Tssr155012 19 10001692 to 10001703 11 + TSS region transcription start site region 155012
Tssr5440 19 10001705 to 10001712 7 + TSS region transcription start site region 5440
Tssr155013 19 10001718 to 10001732 14 + TSS region transcription start site region 155013
Tssr155014 19 10015039 to 10015055 16 + TSS region transcription start site region 155014
Cpgi10597 19 10017759 to 10018616 857 CpG island CpG island 10597
Tssr155015 19 10018220 to 10018237 17 + TSS region transcription start site region 155015
Tssr155016 19 10018241 to 10018257 16 + TSS region transcription start site region 155016
Tssr155017 19 10018265 to 10018276 11 + TSS region transcription start site region 155017
Tssr155018 19 10022769 to 10022799 30 + TSS region transcription start site region 155018
Tssr155019 19 10028464 to 10028477 13 + TSS region transcription start site region 155019
Tssr155020 19 10034672 to 10034689 17 + TSS region transcription start site region 155020
Cpgi10598 19 10040911 to 10042559 1648 CpG island CpG island 10598
Fads3 19 10041548 to 10059671 18123 + protein coding gene fatty acid desaturase 3
Tssr155021 19 10041551 to 10041581 30 + TSS region transcription start site region 155021
Tssr155022 19 10041660 to 10041680 20 + TSS region transcription start site region 155022
Gm29917 19 10046264 to 10047940 1676 - lncRNA gene predicted gene, 29917
D19Mit51 19 10050002 to 10050083 81 DNA segment DNA segment, Chr 19, Massachusetts Institute of Technology 51