Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:9757297-10014533

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102 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
ocd 19 5758427 to 9933333 4174906 heritable phenotypic marker osteochondrodystrophy
Scgb2a2 19 9847435 to 9852046 4611 + protein coding gene secretoglobin, family 2A, member 2
Tssr154975 19 9847556 to 9847560 4 + TSS region transcription start site region 154975
Gm22369 19 9855319 to 9855422 103 + miRNA gene predicted gene, 22369
Incenp 19 9872297 to 9899533 27236 - protein coding gene inner centromere protein
Gm19054 19 9888477 to 9889169 692 + pseudogene predicted gene, 19054
Tssr158104 19 9891119 to 9891122 3 - TSS region transcription start site region 158104
Tssr158105 19 9895944 to 9895962 18 - TSS region transcription start site region 158105
Cpgi10593 19 9898910 to 9899884 974 CpG island CpG island 10593
Tssr158106 19 9899390 to 9899401 11 - TSS region transcription start site region 158106
Tssr158107 19 9899427 to 9899439 12 - TSS region transcription start site region 158107
Tssr158108 19 9899450 to 9899501 51 - TSS region transcription start site region 158108
Tssr154976 19 9899643 to 9899652 9 + TSS region transcription start site region 154976
Tssr154977 19 9899669 to 9899692 23 + TSS region transcription start site region 154977
Tssr154978 19 9899700 to 9899722 22 + TSS region transcription start site region 154978
Tssr154979 19 9899723 to 9899738 15 + TSS region transcription start site region 154979
Tssr154980 19 9899947 to 9899977 30 + TSS region transcription start site region 154980
Tssr158109 19 9905861 to 9905876 15 - TSS region transcription start site region 158109
Gm24484 19 9908158 to 9908278 120 + miRNA gene predicted gene, 24484
Tssr158110 19 9914150 to 9914168 18 - TSS region transcription start site region 158110
Tssr158111 19 9914174 to 9914209 35 - TSS region transcription start site region 158111
Tssr154981 19 9914551 to 9914562 11 + TSS region transcription start site region 154981
Tssr154982 19 9914574 to 9914591 17 + TSS region transcription start site region 154982
Gm36913 19 9924510 to 9947628 23118 - lncRNA gene predicted gene, 36913
Tssr158112 19 9928364 to 9928385 21 - TSS region transcription start site region 158112
Tssr158113 19 9931147 to 9931163 16 - TSS region transcription start site region 158113
Tssr158114 19 9931173 to 9931189 16 - TSS region transcription start site region 158114
Tssr158115 19 9931250 to 9931253 3 - TSS region transcription start site region 158115
D19Mit56 19 9933199 to 9933333 134 DNA segment DNA segment, Chr 19, Massachusetts Institute of Technology 56
Tssr158116 19 9936703 to 9936731 28 - TSS region transcription start site region 158116
Tssr158117 19 9938762 to 9938808 46 - TSS region transcription start site region 158117
Cpgi10594 19 9938780 to 9938958 178 CpG island CpG island 10594
Tssr158118 19 9938834 to 9938849 15 - TSS region transcription start site region 158118
Tssr154983 19 9938914 to 9938927 13 + TSS region transcription start site region 154983
Tssr154984 19 9939175 to 9939189 14 + TSS region transcription start site region 154984
Tssr154985 19 9939253 to 9939271 18 + TSS region transcription start site region 154985
Tssr154986 19 9939279 to 9939291 12 + TSS region transcription start site region 154986
D19Dcr73 19 9943003 to 9943098 95 DNA segment DNA Segment, Chr 19, Derry C. Roopenian 73
Tssr158119 19 9945864 to 9945875 11 - TSS region transcription start site region 158119
Tssr158120 19 9945892 to 9945903 11 - TSS region transcription start site region 158120
Tssr158121 19 9947987 to 9947996 9 - TSS region transcription start site region 158121
Tssr158122 19 9954198 to 9954222 24 - TSS region transcription start site region 158122
Tssr158123 19 9954473 to 9954491 18 - TSS region transcription start site region 158123
Tssr158124 19 9954504 to 9954526 22 - TSS region transcription start site region 158124
Tssr154987 19 9954683 to 9954718 35 + TSS region transcription start site region 154987
Tssr154988 19 9954753 to 9954781 28 + TSS region transcription start site region 154988
Tssr154989 19 9954842 to 9954855 13 + TSS region transcription start site region 154989
Tssr154990 19 9954872 to 9954888 16 + TSS region transcription start site region 154990
Tssr158125 19 9955033 to 9955046 13 - TSS region transcription start site region 158125
Tssr154991 19 9955086 to 9955096 10 + TSS region transcription start site region 154991
Tssr154992 19 9955134 to 9955146 12 + TSS region transcription start site region 154992
Tssr158126 19 9964630 to 9964638 8 - TSS region transcription start site region 158126
Gm41806 19 9970121 to 9971605 1484 + lncRNA gene predicted gene, 41806
Tssr158127 19 9974862 to 9974868 6 - TSS region transcription start site region 158127
Tssr154993 19 9975172 to 9975202 30 + TSS region transcription start site region 154993
Tssr158128 19 9977745 to 9977752 7 - TSS region transcription start site region 158128
Tssr154994 19 9977999 to 9978038 39 + TSS region transcription start site region 154994
Tssr158129 19 9978424 to 9978431 7 - TSS region transcription start site region 158129
Tssr158130 19 9978461 to 9978502 41 - TSS region transcription start site region 158130
Tssr154995 19 9978790 to 9978803 13 + TSS region transcription start site region 154995
Tssr154996 19 9978926 to 9978957 31 + TSS region transcription start site region 154996
Tssr154997 19 9980546 to 9980564 18 + TSS region transcription start site region 154997
Tssr154998 19 9980576 to 9980606 30 + TSS region transcription start site region 154998
Tssr154999 19 9980639 to 9980650 11 + TSS region transcription start site region 154999
Tssr155000 19 9980682 to 9980697 15 + TSS region transcription start site region 155000
Tssr155001 19 9980707 to 9980716 9 + TSS region transcription start site region 155001
Tssr155002 19 9980858 to 9980867 9 + TSS region transcription start site region 155002
Cpgi10595 19 9982047 to 9983385 1338 CpG island CpG island 10595
Tssr158131 19 9982425 to 9982435 10 - TSS region transcription start site region 158131
Tssr158132 19 9982441 to 9982449 8 - TSS region transcription start site region 158132
Tssr158133 19 9982484 to 9982506 22 - TSS region transcription start site region 158133
Tssr158134 19 9982512 to 9982531 19 - TSS region transcription start site region 158134
Tssr158135 19 9982546 to 9982567 21 - TSS region transcription start site region 158135
Tssr155003 19 9982694 to 9982711 17 + TSS region transcription start site region 155003
Fth1 19 9982703 to 9985092 2389 + protein coding gene ferritin heavy polypeptide 1
Tssr155004 19 9982848 to 9982852 4 + TSS region transcription start site region 155004
Tssr158136 19 9982891 to 9982940 49 - TSS region transcription start site region 158136
Tssr155005 19 9983088 to 9983118 30 + TSS region transcription start site region 155005
Tssr155006 19 9984178 to 9984219 41 + TSS region transcription start site region 155006
Tssr158137 19 9984219 to 9984237 18 - TSS region transcription start site region 158137
Tssr155007 19 9984247 to 9984292 45 + TSS region transcription start site region 155007
Tssr158138 19 9984265 to 9984326 61 - TSS region transcription start site region 158138
Tssr155008 19 9984557 to 9984583 26 + TSS region transcription start site region 155008
Tssr158139 19 9984585 to 9984619 34 - TSS region transcription start site region 158139
Tssr158140 19 9984806 to 9984840 34 - TSS region transcription start site region 158140
Tssr158141 19 9984857 to 9984868 11 - TSS region transcription start site region 158141
Tssr158142 19 9984873 to 9984893 20 - TSS region transcription start site region 158142
Tssr155009 19 9984903 to 9984929 26 + TSS region transcription start site region 155009
Tssr158143 19 9984932 to 9984959 27 - TSS region transcription start site region 158143
Tssr158144 19 9985089 to 9985097 8 - TSS region transcription start site region 158144
Tssr155010 19 9985093 to 9985117 24 + TSS region transcription start site region 155010
Tssr155011 19 9991589 to 9991590 1 + TSS region transcription start site region 155011
Cpgi10596 19 9992751 to 9993316 565 CpG island CpG island 10596
Tssr158145 19 9992956 to 9992993 37 - TSS region transcription start site region 158145
Tssr158146 19 10001561 to 10001582 21 - TSS region transcription start site region 158146
Tssr158147 19 10001585 to 10001622 37 - TSS region transcription start site region 158147
Tssr158148 19 10001625 to 10001632 7 - TSS region transcription start site region 158148
Best1 19 10001633 to 9985174 -16459 - protein coding gene bestrophin 1
Rab3il1 19 10001674 to 10038380 36706 + protein coding gene RAB3A interacting protein (rabin3)-like 1
Tssr155012 19 10001692 to 10001703 11 + TSS region transcription start site region 155012
Tssr5440 19 10001705 to 10001712 7 + TSS region transcription start site region 5440
Tssr155013 19 10001718 to 10001732 14 + TSS region transcription start site region 155013