Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:8851559-8895663

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31 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Lrrn4cl 19 8850785 to 8853909 3124 + protein coding gene LRRN4 C-terminal like
D19Mit125 19 8853007 to 8853116 109 DNA segment DNA Segment, Chr 19, Massachusetts Institute of Technology 125
Cpgi10580 19 8871385 to 8872126 741 CpG island CpG island 10580
Tssr154863 19 8871512 to 8871559 47 + TSS region transcription start site region 154863
Ubxn1 19 8871559 to 8875663 4104 + protein coding gene UBX domain protein 1
Tssr154864 19 8871560 to 8871598 38 + TSS region transcription start site region 154864
Tssr154865 19 8871605 to 8871616 11 + TSS region transcription start site region 154865
Tssr154866 19 8871617 to 8871628 11 + TSS region transcription start site region 154866
Tssr154867 19 8871636 to 8871686 50 + TSS region transcription start site region 154867
Tssr154868 19 8873559 to 8873584 25 + TSS region transcription start site region 154868
Uqcc3 19 8880016 to 8880933 917 - protein coding gene ubiquinol-cytochrome c reductase complex assembly factor 3
Cpgi10581 19 8880189 to 8880957 768 CpG island CpG island 10581
Tssr158075 19 8880832 to 8880854 22 - TSS region transcription start site region 158075
Tssr158076 19 8880883 to 8880928 45 - TSS region transcription start site region 158076
Tssr154869 19 8883848 to 8883861 13 + TSS region transcription start site region 154869
Tssr154870 19 8883865 to 8883909 44 + TSS region transcription start site region 154870
Lbhd1 19 8883878 to 8890759 6881 + protein coding gene LBH domain containing 1
Tssr154871 19 8883910 to 8883928 18 + TSS region transcription start site region 154871
Gm49403 19 8883930 to 8887258 3328 + protein coding gene predicted gene, 49403
5730408K05Rik 19 8888387 to 8888770 383 - lncRNA gene RIKEN cDNA 5730408K05 gene
Cpgi10582 19 8888388 to 8889343 955 CpG island CpG island 10582
Snora57 19 8888538 to 8888685 147 - snoRNA gene small nucleolar RNA, H/ACA box 57
Mir5136 19 8888699 to 8888774 75 - miRNA gene microRNA 5136
Tssr158077 19 8888769 to 8888770 1 - TSS region transcription start site region 158077
Tssr154872 19 8888880 to 8888925 45 + TSS region transcription start site region 154872
1810009A15Rik 19 8888883 to 8890759 1876 + protein coding gene RIKEN cDNA 1810009A15 gene
Gm49416 19 8888926 to 8895227 6301 + protein coding gene predicted gene, 49416
Tssr154873 19 8888946 to 8888953 7 + TSS region transcription start site region 154873
Cpgi10583 19 8892708 to 8893417 709 CpG island CpG island 10583
Ints5 19 8892987 to 8897890 4903 + protein coding gene integrator complex subunit 5
Tssr154874 19 8892998 to 8893052 54 + TSS region transcription start site region 154874