MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 19:8742079-8772093

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19 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Cpgi10570	19	8741032 to 8742437	1405		CpG island	CpG island 10570
Stx5a	19	8741424 to 8755642	14218	+	protein coding gene	syntaxin 5A
Mir6992	19	8742971 to 8743079	108	+	miRNA gene	microRNA 6992
1700023D09Rik	19	8754789 to 8756969	2180	-	lncRNA gene	RIKEN cDNA 1700023D09 gene
Cpgi10571	19	8756683 to 8757585	902		CpG island	CpG island 10571
Tssr154814	19	8756723 to 8756744	21	+	TSS region	transcription start site region 154814
Tssr158049	19	8756898 to 8756913	15	-	TSS region	transcription start site region 158049
Tssr154815	19	8757079 to 8757093	14	+	TSS region	transcription start site region 154815
Tssr154816	19	8757099 to 8757126	27	+	TSS region	transcription start site region 154816
Nxf1	19	8757103 to 8770910	13807	+	protein coding gene	nuclear RNA export factor 1
Tssr154817	19	8757139 to 8757155	16	+	TSS region	transcription start site region 154817
Tssr154818	19	8757414 to 8757447	33	+	TSS region	transcription start site region 154818
Tssr154819	19	8765030 to 8765034	4	+	TSS region	transcription start site region 154819
Tssr154820	19	8766714 to 8766727	13	+	TSS region	transcription start site region 154820
Cpgi10572	19	8770849 to 8771449	600		CpG island	CpG island 10572
Tssr154821	19	8770983 to 8771019	36	+	TSS region	transcription start site region 154821
Tmem223	19	8770996 to 8772475	1479	+	protein coding gene	transmembrane protein 223
Tssr154822	19	8771037 to 8771055	18	+	TSS region	transcription start site region 154822
Tssr154823	19	8771058 to 8771069	11	+	TSS region	transcription start site region 154823