Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:6912593-6972607

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38 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Esrra 19 6910977 to 6921813 10836 - protein coding gene estrogen related receptor, alpha
Mir6990 19 6914196 to 6914286 90 - miRNA gene microRNA 6990
Cpgi10529 19 6920964 to 6922647 1683 CpG island CpG island 10529
Tssr157895 19 6921753 to 6921803 50 - TSS region transcription start site region 157895
Tssr157896 19 6921804 to 6921834 30 - TSS region transcription start site region 157896
Catsperz 19 6922426 to 6925380 2954 - protein coding gene cation channel sperm associated auxiliary subunit zeta
Cpgi10530 19 6924593 to 6925309 716 CpG island CpG island 10530
Tssr157897 19 6925311 to 6925321 10 - TSS region transcription start site region 157897
Tssr157898 19 6925330 to 6925366 36 - TSS region transcription start site region 157898
Tssr157899 19 6925367 to 6925381 14 - TSS region transcription start site region 157899
Kcnk4 19 6925710 to 6934515 8805 - protein coding gene potassium channel, subfamily K, member 4
Cpgi10531 19 6925832 to 6926412 580 CpG island CpG island 10531
Cpgi10532 19 6926891 to 6927235 344 CpG island CpG island 10532
Tssr154696 19 6927106 to 6927119 13 + TSS region transcription start site region 154696
Gm46646 19 6927166 to 6929518 2352 + lncRNA gene predicted gene, 46646
Tssr157900 19 6933270 to 6933281 11 - TSS region transcription start site region 157900
Cpgi10533 19 6933353 to 6934752 1399 CpG island CpG island 10533
Tssr157901 19 6934191 to 6934218 27 - TSS region transcription start site region 157901
Gpr137 19 6938069 to 6942450 4381 - protein coding gene G protein-coupled receptor 137
Cpgi10534 19 6940740 to 6942652 1912 CpG island CpG island 10534
Tssr157902 19 6941428 to 6941518 90 - TSS region transcription start site region 157902
Tssr157903 19 6941821 to 6941830 9 - TSS region transcription start site region 157903
Bad 19 6941861 to 6951898 10037 + protein coding gene BCL2-associated agonist of cell death
Tssr154697 19 6941875 to 6941890 15 + TSS region transcription start site region 154697
Tssr154698 19 6941901 to 6941932 31 + TSS region transcription start site region 154698
Tssr157904 19 6942406 to 6942443 37 - TSS region transcription start site region 157904
Tssr154699 19 6942543 to 6942584 41 + TSS region transcription start site region 154699
Tssr154700 19 6942593 to 6942607 14 + TSS region transcription start site region 154700
Tssr154701 19 6942623 to 6942638 15 + TSS region transcription start site region 154701
Gm19053 19 6945071 to 6945620 549 - pseudogene predicted gene, 19053
Cpgi10535 19 6950565 to 6952500 1935 CpG island CpG island 10535
Tssr154702 19 6950721 to 6950736 15 + TSS region transcription start site region 154702
Tssr154703 19 6950746 to 6950765 19 + TSS region transcription start site region 154703
Tssr157905 19 6951473 to 6951514 41 - TSS region transcription start site region 157905
Plcb3 19 6953714 to 6969759 16045 - protein coding gene phospholipase C, beta 3
Cpgi10536 19 6969048 to 6970529 1481 CpG island CpG island 10536
Tssr157906 19 6969732 to 6969743 11 - TSS region transcription start site region 157906
Tssr157907 19 6969746 to 6969808 62 - TSS region transcription start site region 157907