Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:6236131-6317739

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46 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi10503 19 6235342 to 6236284 942 CpG island CpG island 10503
Cpgi10504 19 6241413 to 6242256 843 CpG island CpG island 10504
Atg2a 19 6241664 to 6262304 20640 + protein coding gene autophagy related 2A
Tssr154593 19 6241682 to 6241694 12 + TSS region transcription start site region 154593
Tssr154594 19 6241699 to 6241734 35 + TSS region transcription start site region 154594
Tssr5422 19 6242373 to 6242396 23 - TSS region transcription start site region 5422
Tssr154595 19 6244836 to 6244843 7 + TSS region transcription start site region 154595
Tssr154596 19 6263261 to 6263283 22 + TSS region transcription start site region 154596
Tssr154597 19 6263605 to 6263632 27 + TSS region transcription start site region 154597
Tssr157846 19 6264408 to 6264418 10 - TSS region transcription start site region 157846
Mirc17 19 6264643 to 6264932 289 complex/cluster/region microRNA cluster 17, including Mir194-2 through Mir192
Mir194-2 19 6264643 to 6264728 85 + miRNA gene microRNA 194-2
Mir192 19 6264844 to 6264932 88 + miRNA gene microRNA 192
Gm14963 19 6268795 to 6276605 7810 - lncRNA gene predicted gene 14963
Tssr154598 19 6269040 to 6269073 33 + TSS region transcription start site region 154598
Tssr154599 19 6275921 to 6275928 7 + TSS region transcription start site region 154599
Cpgi10505 19 6276131 to 6277739 1608 CpG island CpG island 10505
Tssr154600 19 6276168 to 6276172 4 + TSS region transcription start site region 154600
Tssr154601 19 6276780 to 6276792 12 + TSS region transcription start site region 154601
Tssr154602 19 6276850 to 6276891 41 + TSS region transcription start site region 154602
Ehd1 19 6276896 to 6300096 23200 + protein coding gene EH-domain containing 1
Tssr154603 19 6276899 to 6276936 37 + TSS region transcription start site region 154603
Tssr157847 19 6277724 to 6277766 42 - TSS region transcription start site region 157847
Tssr157848 19 6278195 to 6278220 25 - TSS region transcription start site region 157848
Tssr154604 19 6282063 to 6282067 4 + TSS region transcription start site region 154604
Tssr154605 19 6282745 to 6282761 16 + TSS region transcription start site region 154605
Tssr154606 19 6294427 to 6294445 18 + TSS region transcription start site region 154606
Tssr157849 19 6296658 to 6296665 7 - TSS region transcription start site region 157849
Tssr154607 19 6296822 to 6296847 25 + TSS region transcription start site region 154607
Tssr154608 19 6297902 to 6297924 22 + TSS region transcription start site region 154608
Tssr154609 19 6297943 to 6297969 26 + TSS region transcription start site region 154609
Tssr154610 19 6297986 to 6297995 9 + TSS region transcription start site region 154610
Tssr154611 19 6298289 to 6298294 5 + TSS region transcription start site region 154611
Tssr154612 19 6298700 to 6298738 38 + TSS region transcription start site region 154612
Tssr154613 19 6298845 to 6298863 18 + TSS region transcription start site region 154613
Tssr157850 19 6298891 to 6298902 11 - TSS region transcription start site region 157850
Tssr154614 19 6299124 to 6299154 30 + TSS region transcription start site region 154614
Tssr157851 19 6299579 to 6299619 40 - TSS region transcription start site region 157851
Tssr154615 19 6299726 to 6299748 22 + TSS region transcription start site region 154615
Tssr154616 19 6299771 to 6299782 11 + TSS region transcription start site region 154616
Cpgi10506 19 6305962 to 6307045 1083 CpG island CpG island 10506
Cdc42bpg 19 6306457 to 6325653 19196 + protein coding gene CDC42 binding protein kinase gamma (DMPK-like)
Tssr154617 19 6306538 to 6306553 15 + TSS region transcription start site region 154617
Tssr154618 19 6306626 to 6306638 12 + TSS region transcription start site region 154618
Tssr154619 19 6306872 to 6306896 24 + TSS region transcription start site region 154619
Tssr157852 19 6307836 to 6307845 9 - TSS region transcription start site region 157852