Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:6048134-6068206

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30 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Syvn1 19 6046576 to 6053712 7136 + protein coding gene synovial apoptosis inhibitor 1, synoviolin
Tssr154543 19 6050630 to 6050653 23 + TSS region transcription start site region 154543
Mir6988 19 6051334 to 6051392 58 + miRNA gene microRNA 6988
Tssr154544 19 6051392 to 6051406 14 + TSS region transcription start site region 154544
Mrpl49 19 6053630 to 6057751 4121 - protein coding gene mitochondrial ribosomal protein L49
Cpgi10492 19 6057387 to 6058338 951 CpG island CpG island 10492
Tssr157819 19 6057736 to 6057769 33 - TSS region transcription start site region 157819
Fau 19 6057888 to 6059524 1636 + protein coding gene Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed (fox derived)
Tssr154545 19 6057892 to 6057914 22 + TSS region transcription start site region 154545
Tssr154546 19 6057925 to 6057958 33 + TSS region transcription start site region 154546
Tssr154547 19 6058134 to 6058206 72 + TSS region transcription start site region 154547
Tssr154548 19 6058210 to 6058230 20 + TSS region transcription start site region 154548
Tssr154549 19 6058235 to 6058246 11 + TSS region transcription start site region 154549
Tssr154550 19 6058321 to 6058359 38 + TSS region transcription start site region 154550
Cpgi10493 19 6060986 to 6062408 1422 CpG island CpG island 10493
Tssr154551 19 6061176 to 6061235 59 + TSS region transcription start site region 154551
Znhit2 19 6061207 to 6062468 1261 + protein coding gene zinc finger, HIT domain containing 2
Tssr154552 19 6061237 to 6061252 15 + TSS region transcription start site region 154552
Tssr154553 19 6061267 to 6061288 21 + TSS region transcription start site region 154553
Tssr154554 19 6061338 to 6061377 39 + TSS region transcription start site region 154554
Tssr154555 19 6061384 to 6061395 11 + TSS region transcription start site region 154555
Tssr154556 19 6061438 to 6061449 11 + TSS region transcription start site region 154556
Tssr154557 19 6061466 to 6061479 13 + TSS region transcription start site region 154557
Tssr154558 19 6061503 to 6061527 24 + TSS region transcription start site region 154558
Tssr154559 19 6061530 to 6061562 32 + TSS region transcription start site region 154559
Tssr157820 19 6062111 to 6062156 45 - TSS region transcription start site region 157820
Tm7sf2 19 6062821 to 6067850 5029 - protein coding gene transmembrane 7 superfamily member 2
Cpgi10494 19 6067076 to 6068323 1247 CpG island CpG island 10494
Tssr157821 19 6067795 to 6067865 70 - TSS region transcription start site region 157821
Vps51 19 6067842 to 6077187 9345 - protein coding gene VPS51 GARP complex subunit