Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:59196084-59445780

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24 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Kcnk18 19 59219648 to 59237370 17722 + protein coding gene potassium channel, subfamily K, member 18
Cpgi11121 19 59235193 to 59235457 264 CpG island CpG island 11121
Cpgi11122 19 59239524 to 59239745 221 CpG island CpG island 11122
Gm29261 19 59259512 to 59261419 1907 - antisense lncRNA gene predicted gene 29261
Cpgi11123 19 59260744 to 59261612 868 CpG island CpG island 11123
Slc18a2 19 59260878 to 59296012 35134 + protein coding gene solute carrier family 18 (vesicular monoamine), member 2
Tssr157337 19 59260889 to 59260901 12 + TSS region transcription start site region 157337
Tssr157338 19 59260915 to 59260932 17 + TSS region transcription start site region 157338
Tssr157339 19 59284214 to 59284238 24 + TSS region transcription start site region 157339
Pdzd8 19 59296084 to 59345780 49696 - protein coding gene PDZ domain containing 8
Tssr160007 19 59296901 to 59296910 9 - TSS region transcription start site region 160007
Tssr160008 19 59301413 to 59301456 43 - TSS region transcription start site region 160008
Tssr160009 19 59313955 to 59313957 2 - TSS region transcription start site region 160009
Tssr157340 19 59322287 to 59322288 1 + TSS region transcription start site region 157340
Rps12-ps3 19 59322290 to 59322783 493 + pseudogene ribosomal protein S12, pseudogene 3
Cpgi11124 19 59344354 to 59346502 2148 CpG island CpG island 11124
Tssr157341 19 59344493 to 59344512 19 + TSS region transcription start site region 157341
Tssr160010 19 59345224 to 59345236 12 - TSS region transcription start site region 160010
Tssr160011 19 59345538 to 59345558 20 - TSS region transcription start site region 160011
Tssr160012 19 59345746 to 59345853 107 - TSS region transcription start site region 160012
1700022C07Rik 19 59345907 to 59346674 767 unclassified gene RIKEN cDNA 1700022C07 gene
Tssr160013 19 59350704 to 59350722 18 - TSS region transcription start site region 160013
Gm33756 19 59389312 to 59397591 8279 + lincRNA gene predicted gene, 33756
Emx2os 19 59425104 to 59458635 33531 - antisense lncRNA gene Emx2 opposite strand/antisense transcript (non-protein coding)