Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:5308000-5348017

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15 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gal3st3 19 5298331 to 5308738 10407 + protein coding gene galactose-3-O-sulfotransferase 3
Cpgi10441 19 5306679 to 5308221 1542 CpG island CpG island 10441
Tssr154398 19 5308252 to 5308272 20 + TSS region transcription start site region 154398
Tssr154399 19 5308302 to 5308313 11 + TSS region transcription start site region 154399
Tssr154400 19 5308367 to 5308371 4 + TSS region transcription start site region 154400
Nstr1 19 5321112 to 5321310 198 QTL nerve sheath tumor resistance QTL 1
D19Mit59 19 5321112 to 5321310 198 DNA segment DNA segment, Chr 19, Massachusetts Institute of Technology 59
Cpgi10442 19 5323944 to 5324095 151 CpG island CpG island 10442
Gm7074 19 5324333 to 5325253 920 + pseudogene predicted gene 7074
Tssr154401 19 5328000 to 5328017 17 + TSS region transcription start site region 154401
Tssr154402 19 5328049 to 5328061 12 + TSS region transcription start site region 154402
Tssr154403 19 5335619 to 5335630 11 + TSS region transcription start site region 154403
Tssr154404 19 5335644 to 5335651 7 + TSS region transcription start site region 154404
Catsper1 19 5335741 to 5344153 8412 + protein coding gene cation channel, sperm associated 1
Cst6 19 5344705 to 5349574 4869 - protein coding gene cystatin E/M