Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:5025447-5075466

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32 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Slc29a2 19 5024006 to 5031971 7965 + protein coding gene solute carrier family 29 (nucleoside transporters), member 2
Gm30581 19 5037817 to 5038805 988 - lncRNA gene predicted gene, 30581
Cpgi10425 19 5038232 to 5039892 1660 CpG island CpG island 10425
n-TSgct6 19 5038304 to 5038385 81 - tRNA gene nuclear encoded tRNA serine 6 (anticodon GCT)
B4gat1 19 5038826 to 5041134 2308 + protein coding gene beta-1,4-glucuronyltransferase 1
Tssr154376 19 5038847 to 5038938 91 + TSS region transcription start site region 154376
Cpgi10426 19 5041111 to 5041763 652 CpG island CpG island 10426
Tssr154377 19 5041337 to 5041416 79 + TSS region transcription start site region 154377
Brms1 19 5041404 to 5049917 8513 + protein coding gene breast cancer metastasis-suppressor 1
Tssr154378 19 5041515 to 5041533 18 + TSS region transcription start site region 154378
Tssr5409 19 5050447 to 5050466 19 + TSS region transcription start site region 5409
Rin1 19 5050481 to 5057071 6590 + protein coding gene Ras and Rab interactor 1
Tssr154379 19 5050807 to 5050858 51 + TSS region transcription start site region 154379
Cpgi10427 19 5051105 to 5051320 215 CpG island CpG island 10427
Cpgi10428 19 5067751 to 5069061 1310 CpG island CpG island 10428
Tssr154380 19 5068077 to 5068085 8 + TSS region transcription start site region 154380
Cd248 19 5068078 to 5070637 2559 + protein coding gene CD248 antigen, endosialin
Tssr154381 19 5068087 to 5068098 11 + TSS region transcription start site region 154381
Tssr154382 19 5068101 to 5068115 14 + TSS region transcription start site region 154382
Tssr154383 19 5068117 to 5068122 5 + TSS region transcription start site region 154383
Tssr154384 19 5069264 to 5069286 22 + TSS region transcription start site region 154384
Tssr154385 19 5069431 to 5069446 15 + TSS region transcription start site region 154385
Tssr154386 19 5069690 to 5069705 15 + TSS region transcription start site region 154386
Tssr154387 19 5069737 to 5069753 16 + TSS region transcription start site region 154387
Tssr154388 19 5069824 to 5069835 11 + TSS region transcription start site region 154388
Gm30627 19 5070830 to 5072120 1290 - lncRNA gene predicted gene, 30627
Cpgi10429 19 5071527 to 5071768 241 CpG island CpG island 10429
Cpgi10430 19 5071918 to 5072417 499 CpG island CpG island 10430
Tssr157540 19 5072074 to 5072090 16 - TSS region transcription start site region 157540
Tssr157541 19 5072109 to 5072129 20 - TSS region transcription start site region 157541
Gm46658 19 5072130 to 5075259 3129 + lncRNA gene predicted gene, 46658
Tssr157542 19 5072497 to 5072523 26 - TSS region transcription start site region 157542