Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:4892306-5036995

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36 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Bbs1 19 4886898 to 4906627 19729 - protein coding gene Bardet-Biedl syndrome 1 (human)
Gm25334 19 4904673 to 4904782 109 + snRNA gene predicted gene, 25334
Tssr157528 19 4906598 to 4906632 34 - TSS region transcription start site region 157528
Dpp3 19 4907229 to 4928287 21058 - protein coding gene dipeptidylpeptidase 3
Tssr157529 19 4926955 to 4926967 12 - TSS region transcription start site region 157529
Tssr157530 19 4927313 to 4927326 13 - TSS region transcription start site region 157530
Cpgi10417 19 4927938 to 4928624 686 CpG island CpG island 10417
Tssr5408 19 4927969 to 4927997 28 - TSS region transcription start site region 5408
Tssr157531 19 4928241 to 4928259 18 - TSS region transcription start site region 157531
Peli3 19 4930651 to 4943127 12476 - protein coding gene pellino 3
Cpgi10418 19 4942380 to 4943366 986 CpG island CpG island 10418
Tssr157532 19 4943049 to 4943101 52 - TSS region transcription start site region 157532
Tssr157533 19 4961725 to 4961734 9 - TSS region transcription start site region 157533
Cpgi10419 19 4962032 to 4962615 583 CpG island CpG island 10419
Mrpl11 19 4962306 to 4966995 4689 + protein coding gene mitochondrial ribosomal protein L11
Tssr154371 19 4962308 to 4962332 24 + TSS region transcription start site region 154371
Tssr154372 19 4962334 to 4962362 28 + TSS region transcription start site region 154372
Tssr154373 19 4962369 to 4962378 9 + TSS region transcription start site region 154373
Npas4 19 4984355 to 4989971 5616 - protein coding gene neuronal PAS domain protein 4
Cpgi10420 19 4984389 to 4984796 407 CpG island CpG island 10420
Cpgi10421 19 4989512 to 4990080 568 CpG island CpG island 10421
Tssr157534 19 4989964 to 4989972 8 - TSS region transcription start site region 157534
Cpgi10422 19 4990793 to 4991016 223 CpG island CpG island 10422
Tssr157535 19 4993710 to 4993725 15 - TSS region transcription start site region 157535
Cpgi10423 19 5001654 to 5002437 783 CpG island CpG island 10423
Tssr157536 19 5001771 to 5001783 12 - TSS region transcription start site region 157536
Tssr157537 19 5001789 to 5001814 25 - TSS region transcription start site region 157537
Tssr157538 19 5001847 to 5001875 28 - TSS region transcription start site region 157538
D19Dcr1 19 5011606 to 5011701 95 DNA segment DNA Segment, Chr 19, Derry C. Roopenian 1
D19Mit29 19 5011610 to 5011804 194 DNA segment DNA segment, Chr 19, Massachusetts Institute of Technology 29
Gm42063 19 5017356 to 5021765 4409 - lncRNA gene predicted gene, 42063
Cpgi10424 19 5023490 to 5024668 1178 CpG island CpG island 10424
Tssr157539 19 5023926 to 5023979 53 - TSS region transcription start site region 157539
Slc29a2 19 5024006 to 5031971 7965 + protein coding gene solute carrier family 29 (nucleoside transporters), member 2
Tssr154374 19 5024042 to 5024155 113 + TSS region transcription start site region 154374
Tssr154375 19 5024162 to 5024182 20 + TSS region transcription start site region 154375