Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:48184734-50104738

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30 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi11046 19 48204015 to 48204417 402 CpG island CpG island 11046
Cpgi11047 19 48204707 to 48206855 2148 CpG island CpG island 11047
Tssr156922 19 48205477 to 48205511 34 + TSS region transcription start site region 156922
Tssr156923 19 48205513 to 48205525 12 + TSS region transcription start site region 156923
Sorcs3 19 48206025 to 48805505 599480 + protein coding gene sortilin-related VPS10 domain containing receptor 3
Tssr156924 19 48206133 to 48206163 30 + TSS region transcription start site region 156924
D19Dcr59 19 48239596 to 48239705 109 DNA segment DNA Segment, Chr 19, Derry C. Roopenian 59
Gm23857 19 48240535 to 48240645 110 - rRNA gene predicted gene, 23857
1700021N20Rik 19 48240773 to 48241113 340 unclassified gene RIKEN cDNA 1700021N20 gene
D19Dcr60 19 48246306 to 48246408 102 DNA segment DNA Segment, Chr 19, Derry C. Roopenian 60
D19Dcr61 19 48297452 to 48297547 95 DNA segment DNA Segment, Chr 19, Derry C. Roopenian 61
Tssr156925 19 48313346 to 48313351 5 + TSS region transcription start site region 156925
Tssr156926 19 48332176 to 48332184 8 + TSS region transcription start site region 156926
D19Dcr62 19 48394463 to 48394561 98 DNA segment DNA Segment, Chr 19, Derry C. Roopenian 62
D19Dcr63 19 48417106 to 48417207 101 DNA segment DNA Segment, Chr 19, Derry C. Roopenian 63
D19Mit74 19 48534172 to 48534264 92 DNA segment DNA segment, Chr 19, Massachusetts Institute of Technology 74
Tssr5546 19 48769499 to 48769502 3 + TSS region transcription start site region 5546
4930535F04Rik 19 48990468 to 48991980 1512 unclassified gene RIKEN cDNA 4930535F04 gene
D19Dcr64 19 49142478 to 49142573 95 DNA segment DNA Segment, Chr 19, Derry C. Roopenian 64
Tssr5547 19 49144734 to 49144738 4 - TSS region transcription start site region 5547
Tssr159783 19 49368310 to 49368316 6 - TSS region transcription start site region 159783
Gm6975 19 49709521 to 49710153 632 - pseudogene predicted gene 6975
Gm27935 19 49709794 to 49709872 78 - miRNA gene predicted gene, 27935
Siah1-ps1 19 49868272 to 49870143 1871 + pseudogene siah E3 ubiquitin protein ligase 1, pseudogene 1
D19Mit3 19 49953729 to 49953927 198 DNA segment DNA segment, Chr 19, Massachusetts Institute of Technology 3
D19Mit58 19 50003719 to 50003859 140 DNA segment DNA segment, Chr 19, Massachusetts Institute of Technology 58
Lith2 19 50003719 to 50003859 140 QTL lithogenic gene 2
Rpl13a-ps1 19 50030124 to 50030735 611 - pseudogene ribosomal protein 13A, pseudogene 1
Tssr159784 19 50030519 to 50030529 10 - TSS region transcription start site region 159784
Tssr159785 19 50030751 to 50030767 16 - TSS region transcription start site region 159785