Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:47535313-47635320

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Stn1 19 47501048 to 47537121 36073 - protein coding gene STN1, CST complex subunit
Cpgi11033 19 47536843 to 47537295 452 CpG island CpG island 11033
Tssr159739 19 47536997 to 47537049 52 - TSS region transcription start site region 159739
Tssr156867 19 47537212 to 47537221 9 + TSS region transcription start site region 156867
Tssr159740 19 47545827 to 47545845 18 - TSS region transcription start site region 159740
D19Dcr40 19 47546695 to 47546790 95 DNA segment DNA Segment, Chr 19, Derry C. Roopenian 40
D19Dcr41 19 47557688 to 47557783 95 DNA segment DNA Segment, Chr 19, Derry C. Roopenian 41
Cpgi11034 19 47579175 to 47580610 1435 CpG island CpG island 11034
Tssr156868 19 47579411 to 47579425 14 + TSS region transcription start site region 156868
Tssr156869 19 47579602 to 47579681 79 + TSS region transcription start site region 156869
Tssr156870 19 47579688 to 47579714 26 + TSS region transcription start site region 156870
Tssr156871 19 47579732 to 47579743 11 + TSS region transcription start site region 156871
Slk 19 47580019 to 47645246 65227 + protein coding gene STE20-like kinase
Tssr159741 19 47580501 to 47580547 46 - TSS region transcription start site region 159741
Tssr159742 19 47580888 to 47580892 4 - TSS region transcription start site region 159742
Tssr156872 19 47585313 to 47585320 7 + TSS region transcription start site region 156872
D19Dcr42 19 47587483 to 47587578 95 DNA segment DNA Segment, Chr 19, Derry C. Roopenian 42
Gm16068 19 47605899 to 47607226 1327 - antisense lncRNA gene predicted gene 16068
Tssr156873 19 47619724 to 47619737 13 + TSS region transcription start site region 156873
Tssr156874 19 47619751 to 47619816 65 + TSS region transcription start site region 156874
Tssr156875 19 47619822 to 47619837 15 + TSS region transcription start site region 156875
Tssr156876 19 47620376 to 47620391 15 + TSS region transcription start site region 156876
Tssr159743 19 47622299 to 47622316 17 - TSS region transcription start site region 159743
Tssr156877 19 47622628 to 47622646 18 + TSS region transcription start site region 156877
Tssr156878 19 47622652 to 47622664 12 + TSS region transcription start site region 156878
D19Dcr43 19 47623296 to 47623445 149 DNA segment DNA Segment, Chr 19, Derry C. Roopenian 43
Tssr156879 19 47625368 to 47625389 21 + TSS region transcription start site region 156879
Tssr156880 19 47625428 to 47625449 21 + TSS region transcription start site region 156880
D19Dcr44 19 47628832 to 47628956 124 DNA segment DNA Segment, Chr 19, Derry C. Roopenian 44