Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:46505439-47018466

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128 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Sluc1 19 36039544 to 46773082 10733538 QTL susceptibility to lung cancer 1
Trim8 19 46501648 to 46516444 14796 + protein coding gene tripartite motif-containing 8
Tssr156775 19 46511154 to 46511158 4 + TSS region transcription start site region 156775
Tssr156776 19 46514616 to 46514631 15 + TSS region transcription start site region 156776
Cpgi11005 19 46515013 to 46515667 654 CpG island CpG island 11005
Tssr156777 19 46515322 to 46515340 18 + TSS region transcription start site region 156777
Tssr156778 19 46515714 to 46515762 48 + TSS region transcription start site region 156778
Tssr156779 19 46515839 to 46515856 17 + TSS region transcription start site region 156779
Tssr156780 19 46516153 to 46516179 26 + TSS region transcription start site region 156780
Tssr156781 19 46516187 to 46516203 16 + TSS region transcription start site region 156781
Tssr156782 19 46516253 to 46516309 56 + TSS region transcription start site region 156782
Cpgi11006 19 46528646 to 46529024 378 CpG island CpG island 11006
Arl3 19 46531109 to 46573085 41976 - protein coding gene ADP-ribosylation factor-like 3
Tssr159654 19 46558297 to 46558333 36 - TSS region transcription start site region 159654
Tssr5538 19 46558774 to 46558800 26 - TSS region transcription start site region 5538
Cpgi11007 19 46572599 to 46573925 1326 CpG island CpG island 11007
Tssr159655 19 46573059 to 46573082 23 - TSS region transcription start site region 159655
Tssr159656 19 46573096 to 46573207 111 - TSS region transcription start site region 159656
Tssr156783 19 46573362 to 46573421 59 + TSS region transcription start site region 156783
Sfxn2 19 46573365 to 46596898 23533 + protein coding gene sideroflexin 2
Tssr156784 19 46573422 to 46573436 14 + TSS region transcription start site region 156784
Tssr156785 19 46595123 to 46595126 3 + TSS region transcription start site region 156785
Cpgi11008 19 46598830 to 46599689 859 CpG island CpG island 11008
Tssr156786 19 46599081 to 46599150 69 + TSS region transcription start site region 156786
Wbp1l 19 46599106 to 46657389 58283 + protein coding gene WW domain binding protein 1 like
Tssr156787 19 46599152 to 46599178 26 + TSS region transcription start site region 156787
Tssr156788 19 46612485 to 46612494 9 + TSS region transcription start site region 156788
Tssr156789 19 46618647 to 46618653 6 + TSS region transcription start site region 156789
Cpgi11009 19 46618961 to 46619263 302 CpG island CpG island 11009
Tssr159657 19 46619960 to 46619970 10 - TSS region transcription start site region 159657
Tssr159658 19 46619971 to 46620001 30 - TSS region transcription start site region 159658
Tssr156790 19 46623387 to 46623451 64 + TSS region transcription start site region 156790
Tssr156791 19 46624370 to 46624386 16 + TSS region transcription start site region 156791
Tssr5539 19 46635823 to 46635831 8 + TSS region transcription start site region 5539
Tssr156792 19 46652722 to 46652740 18 + TSS region transcription start site region 156792
Tssr156793 19 46654003 to 46654027 24 + TSS region transcription start site region 156793
Tssr156794 19 46654033 to 46654041 8 + TSS region transcription start site region 156794
Tssr156795 19 46654105 to 46654134 29 + TSS region transcription start site region 156795
Tssr156796 19 46654371 to 46654418 47 + TSS region transcription start site region 156796
Tssr156797 19 46654610 to 46654636 26 + TSS region transcription start site region 156797
Tssr156798 19 46654821 to 46654843 22 + TSS region transcription start site region 156798
Tssr5540 19 46654921 to 46654959 38 - TSS region transcription start site region 5540
Tssr156799 19 46654929 to 46654959 30 + TSS region transcription start site region 156799
Gm36602 19 46657734 to 46666450 8716 - lncRNA gene predicted gene, 36602
Cyp17a1 19 46667165 to 46672974 5809 - protein coding gene cytochrome P450, family 17, subfamily a, polypeptide 1
Tssr156800 19 46668587 to 46668603 16 + TSS region transcription start site region 156800
Gm41857 19 46668680 to 46676083 7403 + lncRNA gene predicted gene, 41857
Tssr156801 19 46669272 to 46669274 2 + TSS region transcription start site region 156801
Tssr159659 19 46670711 to 46670721 10 - TSS region transcription start site region 159659
Tssr159660 19 46672883 to 46672900 17 - TSS region transcription start site region 159660
Tssr159661 19 46673063 to 46673072 9 - TSS region transcription start site region 159661
Gm6967 19 46674273 to 46675279 1006 - pseudogene predicted gene 6967
Tssr159662 19 46675344 to 46675354 10 - TSS region transcription start site region 159662
Cpgi11010 19 46689691 to 46690352 661 CpG island CpG island 11010
Tssr156802 19 46689902 to 46689943 41 + TSS region transcription start site region 156802
Borcs7 19 46689906 to 46703382 13476 + protein coding gene BLOC-1 related complex subunit 7
Tssr159663 19 46690138 to 46690173 35 - TSS region transcription start site region 159663
Tssr159664 19 46701344 to 46701383 39 - TSS region transcription start site region 159664
Cpgi11011 19 46707339 to 46707628 289 CpG island CpG island 11011
As3mt 19 46707443 to 46741095 33652 + protein coding gene arsenic (+3 oxidation state) methyltransferase
Tssr156803 19 46707449 to 46707511 62 + TSS region transcription start site region 156803
Tssr156804 19 46707658 to 46707708 50 + TSS region transcription start site region 156804
Tssr156805 19 46707721 to 46707732 11 + TSS region transcription start site region 156805
Tssr156806 19 46707735 to 46707758 23 + TSS region transcription start site region 156806
Gm10199 19 46760439 to 46763466 3027 unclassified gene predicted gene 10199
Cpgi11012 19 46760765 to 46763322 2557 CpG island CpG island 11012
Tssr159665 19 46761201 to 46761215 14 - TSS region transcription start site region 159665
Tssr159666 19 46761248 to 46761263 15 - TSS region transcription start site region 159666
Tssr156807 19 46761402 to 46761416 14 + TSS region transcription start site region 156807
Cnnm2 19 46761564 to 46878580 117016 + protein coding gene cyclin M2
Tssr156808 19 46761578 to 46761618 40 + TSS region transcription start site region 156808
Tssr156809 19 46761627 to 46761638 11 + TSS region transcription start site region 156809
Tssr156810 19 46761639 to 46761656 17 + TSS region transcription start site region 156810
Tssr156811 19 46761827 to 46761849 22 + TSS region transcription start site region 156811
Tssr156812 19 46763427 to 46763431 4 + TSS region transcription start site region 156812
Tssr156813 19 46772410 to 46772421 11 + TSS region transcription start site region 156813
D19Mit9 19 46772962 to 46773082 120 DNA segment DNA segment, Chr 19, Massachusetts Institute of Technology 9
Tssr156814 19 46819495 to 46819538 43 + TSS region transcription start site region 156814
Tssr156815 19 46846848 to 46846860 12 + TSS region transcription start site region 156815
Tssr159667 19 46863537 to 46863550 13 - TSS region transcription start site region 159667
Tssr159668 19 46863556 to 46863569 13 - TSS region transcription start site region 159668
Tssr159669 19 46863640 to 46863653 13 - TSS region transcription start site region 159669
Tssr156816 19 46863885 to 46863894 9 + TSS region transcription start site region 156816
Tssr156817 19 46863903 to 46863922 19 + TSS region transcription start site region 156817
Tssr159670 19 46864233 to 46864280 47 - TSS region transcription start site region 159670
Tssr5541 19 46868971 to 46868993 22 - TSS region transcription start site region 5541
A930026I22Rik 19 46882356 to 46883973 1617 unclassified gene RIKEN cDNA A930026I22 gene
Nt5c2 19 46886831 to 47015153 128322 - protein coding gene 5'-nucleotidase, cytosolic II
Gm9751 19 46889007 to 46909574 20567 unclassified gene predicted gene 9751
Tssr159671 19 46901467 to 46901471 4 - TSS region transcription start site region 159671
Tssr159672 19 46908645 to 46908649 4 - TSS region transcription start site region 159672
Gm18490 19 46920507 to 46921270 763 - pseudogene predicted gene, 18490
Tssr159673 19 46925558 to 46925562 4 - TSS region transcription start site region 159673
Tssr159674 19 46929222 to 46929227 5 - TSS region transcription start site region 159674
Tssr159675 19 46932298 to 46932302 4 - TSS region transcription start site region 159675
Tssr159676 19 46941035 to 46941044 9 - TSS region transcription start site region 159676
Tssr159677 19 46943938 to 46943955 17 - TSS region transcription start site region 159677
Tssr159678 19 46946642 to 46946661 19 - TSS region transcription start site region 159678
Cpgi11013 19 46961542 to 46962659 1117 CpG island CpG island 11013
Tssr156818 19 46961808 to 46961820 12 + TSS region transcription start site region 156818
Tssr159679 19 46961876 to 46961895 19 - TSS region transcription start site region 159679
Tssr159680 19 46961916 to 46961930 14 - TSS region transcription start site region 159680
Tssr159681 19 46961936 to 46961972 36 - TSS region transcription start site region 159681
Tssr159682 19 46962301 to 46962317 16 - TSS region transcription start site region 159682
Tssr159683 19 46962325 to 46962333 8 - TSS region transcription start site region 159683
Tssr159684 19 46962509 to 46962579 70 - TSS region transcription start site region 159684
Tssr156819 19 46962658 to 46962699 41 + TSS region transcription start site region 156819
Tssr159685 19 46969540 to 46969555 15 - TSS region transcription start site region 159685
Tssr159686 19 46969562 to 46969572 10 - TSS region transcription start site region 159686
D19Dcr36 19 46970236 to 46970333 97 DNA segment DNA Segment, Chr 19, Derry C. Roopenian 36
Tssr159687 19 46985363 to 46985368 5 - TSS region transcription start site region 159687
Tssr159688 19 46985372 to 46985398 26 - TSS region transcription start site region 159688
Tssr156820 19 46985518 to 46985532 14 + TSS region transcription start site region 156820
Tssr159689 19 46987809 to 46987820 11 - TSS region transcription start site region 159689
Tssr156821 19 46987925 to 46987956 31 + TSS region transcription start site region 156821
Gm18657 19 46996290 to 46997196 906 + pseudogene predicted gene, 18657
Cpgi11014 19 47014041 to 47016016 1975 CpG island CpG island 11014
Tssr156822 19 47014477 to 47014486 9 + TSS region transcription start site region 156822
Tssr156823 19 47014660 to 47014671 11 + TSS region transcription start site region 156823
Tssr156824 19 47014672 to 47014691 19 + TSS region transcription start site region 156824
Ina 19 47014698 to 47024358 9660 + protein coding gene internexin neuronal intermediate filament protein, alpha
Tssr159690 19 47015113 to 47015206 93 - TSS region transcription start site region 159690
Tssr156825 19 47015204 to 47015216 12 + TSS region transcription start site region 156825
Tssr156826 19 47015219 to 47015289 70 + TSS region transcription start site region 156826
Tssr156827 19 47015299 to 47015314 15 + TSS region transcription start site region 156827
Tssr156828 19 47015317 to 47015335 18 + TSS region transcription start site region 156828
Cpgi11015 19 47016479 to 47016757 278 CpG island CpG island 11015
Tssr156829 19 47016826 to 47016829 3 + TSS region transcription start site region 156829