Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:46395826-46605837

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57 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi11001 19 46394827 to 46395902 1075 CpG island CpG island 11001
Cpgi11002 19 46396690 to 46397425 735 CpG island CpG island 11002
Tssr156753 19 46396885 to 46396999 114 + TSS region transcription start site region 156753
Sufu 19 46396896 to 46488804 91908 + protein coding gene SUFU negative regulator of hedgehog signaling
Tssr156754 19 46397009 to 46397033 24 + TSS region transcription start site region 156754
9430020M11Rik 19 46426854 to 46427655 801 unclassified gene RIKEN cDNA 9430020M11 gene
Tssr156755 19 46454693 to 46454705 12 + TSS region transcription start site region 156755
Tssr156756 19 46463942 to 46463944 2 + TSS region transcription start site region 156756
Cpgi11003 19 46499809 to 46500513 704 CpG island CpG island 11003
Tssr156757 19 46500042 to 46500056 14 + TSS region transcription start site region 156757
Tssr156758 19 46500167 to 46500197 30 + TSS region transcription start site region 156758
Tssr156759 19 46500201 to 46500230 29 + TSS region transcription start site region 156759
Tssr156760 19 46500234 to 46500259 25 + TSS region transcription start site region 156760
Tssr156761 19 46500611 to 46500651 40 + TSS region transcription start site region 156761
Tssr156762 19 46500756 to 46500770 14 + TSS region transcription start site region 156762
Cpgi11004 19 46500770 to 46503221 2451 CpG island CpG island 11004
Tssr156763 19 46500826 to 46500837 11 + TSS region transcription start site region 156763
Tssr159651 19 46500940 to 46500945 5 - TSS region transcription start site region 159651
Tssr156764 19 46500988 to 46501000 12 + TSS region transcription start site region 156764
Tssr156765 19 46501167 to 46501197 30 + TSS region transcription start site region 156765
Tssr156766 19 46501431 to 46501471 40 + TSS region transcription start site region 156766
Gm9798 19 46501647 to 46502781 1134 unclassified gene predicted gene 9798
Trim8 19 46501648 to 46516444 14796 + protein coding gene tripartite motif-containing 8
Tssr156767 19 46501664 to 46501675 11 + TSS region transcription start site region 156767
Tssr156768 19 46501685 to 46501707 22 + TSS region transcription start site region 156768
Tssr156769 19 46501715 to 46501733 18 + TSS region transcription start site region 156769
Tssr156770 19 46501738 to 46501773 35 + TSS region transcription start site region 156770
Tssr156771 19 46501790 to 46501802 12 + TSS region transcription start site region 156771
Tssr156772 19 46501812 to 46501832 20 + TSS region transcription start site region 156772
Tssr156773 19 46502290 to 46502325 35 + TSS region transcription start site region 156773
Tssr156774 19 46502880 to 46502912 32 + TSS region transcription start site region 156774
Tssr159652 19 46502936 to 46502950 14 - TSS region transcription start site region 159652
Tssr159653 19 46503676 to 46503696 20 - TSS region transcription start site region 159653
Tssr156775 19 46511154 to 46511158 4 + TSS region transcription start site region 156775
Tssr156776 19 46514616 to 46514631 15 + TSS region transcription start site region 156776
Cpgi11005 19 46515013 to 46515667 654 CpG island CpG island 11005
Tssr156777 19 46515322 to 46515340 18 + TSS region transcription start site region 156777
Tssr156778 19 46515714 to 46515762 48 + TSS region transcription start site region 156778
Tssr156779 19 46515839 to 46515856 17 + TSS region transcription start site region 156779
Tssr156780 19 46516153 to 46516179 26 + TSS region transcription start site region 156780
Tssr156781 19 46516187 to 46516203 16 + TSS region transcription start site region 156781
Tssr156782 19 46516253 to 46516309 56 + TSS region transcription start site region 156782
Cpgi11006 19 46528646 to 46529024 378 CpG island CpG island 11006
Arl3 19 46531109 to 46573085 41976 - protein coding gene ADP-ribosylation factor-like 3
Tssr159654 19 46558297 to 46558333 36 - TSS region transcription start site region 159654
Tssr5538 19 46558774 to 46558800 26 - TSS region transcription start site region 5538
Cpgi11007 19 46572599 to 46573925 1326 CpG island CpG island 11007
Tssr159655 19 46573059 to 46573082 23 - TSS region transcription start site region 159655
Tssr159656 19 46573096 to 46573207 111 - TSS region transcription start site region 159656
Tssr156783 19 46573362 to 46573421 59 + TSS region transcription start site region 156783
Sfxn2 19 46573365 to 46596898 23533 + protein coding gene sideroflexin 2
Tssr156784 19 46573422 to 46573436 14 + TSS region transcription start site region 156784
Tssr156785 19 46595123 to 46595126 3 + TSS region transcription start site region 156785
Cpgi11008 19 46598830 to 46599689 859 CpG island CpG island 11008
Tssr156786 19 46599081 to 46599150 69 + TSS region transcription start site region 156786
Wbp1l 19 46599106 to 46657389 58283 + protein coding gene WW domain binding protein 1 like
Tssr156787 19 46599152 to 46599178 26 + TSS region transcription start site region 156787