MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 19:4610272-4640321

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Pcx	19	4510472 to 4621752	111280	+	protein coding gene	pyruvate carboxylase
Lrfn4	19	4611785 to 4615667	3882	-	protein coding gene	leucine rich repeat and fibronectin type III domain containing 4
Cpgi10403	19	4614279 to 4616070	1791		CpG island	CpG island 10403
Tssr157502	19	4615145 to 4615199	54	-	TSS region	transcription start site region 157502
Tssr157503	19	4615453 to 4615512	59	-	TSS region	transcription start site region 157503
Tssr157504	19	4615518 to 4615539	21	-	TSS region	transcription start site region 157504
Tssr157505	19	4615647 to 4615700	53	-	TSS region	transcription start site region 157505
Tssr154335	19	4618432 to 4618449	17	+	TSS region	transcription start site region 154335
Tssr154336	19	4621135 to 4621148	13	+	TSS region	transcription start site region 154336
Rce1	19	4622591 to 4625641	3050	-	protein coding gene	Ras converting CAAX endopeptidase 1
Mir6986	19	4623898 to 4623955	57	-	miRNA gene	microRNA 6986
Cpgi10404	19	4625016 to 4626186	1170		CpG island	CpG island 10404
Tssr157506	19	4625084 to 4625123	39	-	TSS region	transcription start site region 157506
Tssr157507	19	4625272 to 4625321	49	-	TSS region	transcription start site region 157507
Tssr157508	19	4625323 to 4625361	38	-	TSS region	transcription start site region 157508
9030625N01Rik	19	4625394 to 4629856	4462		unclassified non-coding RNA gene	RIKEN cDNA 9030625N01 gene
Tssr157509	19	4625612 to 4625658	46	-	TSS region	transcription start site region 157509
Gm960	19	4625734 to 4698668	72934	-	protein coding gene	predicted gene 960