Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:4605734-4718668

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36 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Pcx 19 4510472 to 4621752 111280 + protein coding gene pyruvate carboxylase
Tssr154334 19 4609920 to 4609940 20 + TSS region transcription start site region 154334
Lrfn4 19 4611785 to 4615667 3882 - protein coding gene leucine rich repeat and fibronectin type III domain containing 4
Cpgi10403 19 4614279 to 4616070 1791 CpG island CpG island 10403
Tssr157502 19 4615145 to 4615199 54 - TSS region transcription start site region 157502
Tssr157503 19 4615453 to 4615512 59 - TSS region transcription start site region 157503
Tssr157504 19 4615518 to 4615539 21 - TSS region transcription start site region 157504
Tssr157505 19 4615647 to 4615700 53 - TSS region transcription start site region 157505
Tssr154335 19 4618432 to 4618449 17 + TSS region transcription start site region 154335
Tssr154336 19 4621135 to 4621148 13 + TSS region transcription start site region 154336
Rce1 19 4622591 to 4625641 3050 - protein coding gene Ras converting CAAX endopeptidase 1
Mir6986 19 4623898 to 4623955 57 - miRNA gene microRNA 6986
Cpgi10404 19 4625016 to 4626186 1170 CpG island CpG island 10404
Tssr157506 19 4625084 to 4625123 39 - TSS region transcription start site region 157506
Tssr157507 19 4625272 to 4625321 49 - TSS region transcription start site region 157507
Tssr157508 19 4625323 to 4625361 38 - TSS region transcription start site region 157508
9030625N01Rik 19 4625394 to 4629856 4462 unclassified non-coding RNA gene RIKEN cDNA 9030625N01 gene
Tssr157509 19 4625612 to 4625658 46 - TSS region transcription start site region 157509
Gm960 19 4625734 to 4698668 72934 - protein coding gene predicted gene 960
Cpgi10405 19 4697962 to 4698715 753 CpG island CpG island 10405
Tssr154337 19 4711153 to 4711258 105 + TSS region transcription start site region 154337
Sptbn2 19 4711223 to 4752359 41136 + protein coding gene spectrin beta, non-erythrocytic 2
Tssr154338 19 4711259 to 4711270 11 + TSS region transcription start site region 154338
Tssr154339 19 4711276 to 4711287 11 + TSS region transcription start site region 154339
Tssr154340 19 4711345 to 4711354 9 + TSS region transcription start site region 154340
Tssr154341 19 4711358 to 4711361 3 + TSS region transcription start site region 154341
Tssr154342 19 4711366 to 4711381 15 + TSS region transcription start site region 154342
Tssr154343 19 4711393 to 4711414 21 + TSS region transcription start site region 154343
Tssr154344 19 4711427 to 4711438 11 + TSS region transcription start site region 154344
Cpgi10406 19 4711497 to 4712947 1450 CpG island CpG island 10406
Gm42061 19 4711651 to 4720886 9235 - protein coding gene predicted gene, 42061
Tssr154345 19 4711954 to 4711982 28 + TSS region transcription start site region 154345
Tssr154346 19 4711995 to 4712008 13 + TSS region transcription start site region 154346
Tssr154347 19 4712071 to 4712111 40 + TSS region transcription start site region 154347
Tssr154348 19 4712118 to 4712173 55 + TSS region transcription start site region 154348
Tssr154349 19 4712204 to 4712218 14 + TSS region transcription start site region 154349