Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:45147684-45320812

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39 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr156678 19 45149833 to 45149878 45 + TSS region transcription start site region 156678
Cpgi10940 19 45150471 to 45151686 1215 CpG island CpG island 10940
Tssr159547 19 45150503 to 45150537 34 - TSS region transcription start site region 159547
Tssr156679 19 45150659 to 45150696 37 + TSS region transcription start site region 156679
Tlx1 19 45150680 to 45156943 6263 + protein coding gene T cell leukemia, homeobox 1
Tssr156680 19 45150786 to 45150814 28 + TSS region transcription start site region 156680
Tssr156681 19 45151594 to 45151595 1 + TSS region transcription start site region 156681
D19Mit53 19 45151909 to 45152019 110 DNA segment DNA segment, Chr 19, Massachusetts Institute of Technology 53
Femwf11 19 45151909 to 45152019 110 QTL femur work to failure 11
Cpgi10941 19 45153206 to 45154746 1540 CpG island CpG island 10941
Tlx1os 19 45154057 to 45159304 5247 - antisense lncRNA gene T cell leukemia, homeobox 1, opposite strand
Cpgi10942 19 45155791 to 45156280 489 CpG island CpG island 10942
Cpgi10943 19 45158978 to 45159428 450 CpG island CpG island 10943
Tssr159548 19 45159302 to 45159312 10 - TSS region transcription start site region 159548
Cpgi10944 19 45163188 to 45163339 151 CpG island CpG island 10944
Cpgi10945 19 45176939 to 45177111 172 CpG island CpG island 10945
Cpgi10946 19 45208265 to 45208502 237 CpG island CpG island 10946
Cpgi10947 19 45221272 to 45221533 261 CpG island CpG island 10947
Cpgi10948 19 45223824 to 45224403 579 CpG island CpG island 10948
Cpgi10949 19 45229179 to 45229738 559 CpG island CpG island 10949
Cpgi10950 19 45230106 to 45230479 373 CpG island CpG island 10950
Cpgi10951 19 45230930 to 45231883 953 CpG island CpG island 10951
Dp(19Lbx1-Fgf8)2Fsp 19 45232684 to 45742915 510231 chromosomal duplication duplication, Chr 19, Francois Spitz 2
Del(19Lbx1-Poll)6Fsp 19 45232684 to 45560531 327847 chromosomal deletion deletion, Chr 19, Francois Spitz 6
Lbx1 19 45232684 to 45235812 3128 - protein coding gene ladybird homeobox 1
Dp(19Lbx1-Fbxw4)3Fsp 19 45232684 to 45660312 427628 chromosomal duplication duplication, Chr 19, Francois Spitz 3
Cpgi10952 19 45233252 to 45234417 1165 CpG island CpG island 10952
Cpgi10953 19 45234649 to 45236931 2282 CpG island CpG island 10953
Tssr156682 19 45235605 to 45235610 5 + TSS region transcription start site region 156682
Tssr159549 19 45236827 to 45236872 45 - TSS region transcription start site region 159549
Cpgi10954 19 45244117 to 45244496 379 CpG island CpG island 10954
Cpgi10955 19 45248634 to 45248971 337 CpG island CpG island 10955
D19Dcr87 19 45268738 to 45268832 94 DNA segment DNA Segment, Chr 19, Derry C. Roopenian 87
Cpgi10956 19 45293585 to 45293907 322 CpG island CpG island 10956
Gm29595 19 45300458 to 45303246 2788 - lincRNA gene predicted gene 29595
Cpgi10957 19 45300987 to 45301422 435 CpG island CpG island 10957
Cpgi10958 19 45301518 to 45302486 968 CpG island CpG island 10958
Gm29593 19 45311300 to 45312247 947 - lincRNA gene predicted gene 29593
Gm29594 19 45317893 to 45318429 536 + lincRNA gene predicted gene 29594