Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:44906119-45008787

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr5530 19 44918432 to 44918467 35 + TSS region transcription start site region 5530
Tssr156631 19 44918501 to 44918516 15 + TSS region transcription start site region 156631
Tssr156632 19 44918539 to 44918553 14 + TSS region transcription start site region 156632
Cpgi10921 19 44930750 to 44931661 911 CpG island CpG island 10921
Slf2 19 44931119 to 44983787 52668 + protein coding gene SMC5-SMC6 complex localization factor 2
Tssr156633 19 44931154 to 44931172 18 + TSS region transcription start site region 156633
Tssr156634 19 44935431 to 44935465 34 + TSS region transcription start site region 156634
Gm25482 19 44945022 to 44945128 106 + snRNA gene predicted gene, 25482
Tssr156635 19 44954742 to 44954746 4 + TSS region transcription start site region 156635
Tssr156636 19 44956996 to 44957000 4 + TSS region transcription start site region 156636
Tssr156637 19 44957395 to 44957399 4 + TSS region transcription start site region 156637
4930414N06Rik 19 44972117 to 44984550 12433 - lncRNA gene RIKEN cDNA 4930414N06 gene
Tssr159541 19 44984525 to 44984548 23 - TSS region transcription start site region 159541
Tssr156638 19 44988366 to 44988376 10 + TSS region transcription start site region 156638
Tssr156639 19 44988924 to 44988942 18 + TSS region transcription start site region 156639
Cpgi10922 19 44988937 to 44989808 871 CpG island CpG island 10922
Tssr156640 19 44989073 to 44989100 27 + TSS region transcription start site region 156640
Sema4g 19 44989101 to 45003397 14296 + protein coding gene sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4G
Tssr156641 19 44989242 to 44989318 76 + TSS region transcription start site region 156641
Tssr156642 19 44989319 to 44989330 11 + TSS region transcription start site region 156642
Tssr156643 19 44990060 to 44990092 32 + TSS region transcription start site region 156643
Tssr156644 19 44992127 to 44992129 2 + TSS region transcription start site region 156644
Tssr156645 19 44992325 to 44992344 19 + TSS region transcription start site region 156645
Tssr156646 19 44992431 to 44992456 25 + TSS region transcription start site region 156646
Tssr156647 19 45002041 to 45002062 21 + TSS region transcription start site region 156647
Mrpl43 19 45005014 to 45006442 1428 - protein coding gene mitochondrial ribosomal protein L43
Tssr156648 19 45005656 to 45005684 28 + TSS region transcription start site region 156648
Cpgi10923 19 45005682 to 45007358 1676 CpG island CpG island 10923
Tssr159542 19 45006111 to 45006122 11 - TSS region transcription start site region 159542
Tssr159543 19 45006385 to 45006450 65 - TSS region transcription start site region 159543
Tssr156649 19 45006475 to 45006524 49 + TSS region transcription start site region 156649
Twnk 19 45006558 to 45012762 6204 + protein coding gene twinkle mtDNA helicase
Tssr156650 19 45006622 to 45006668 46 + TSS region transcription start site region 156650