Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:42665388-43285491

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24 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi10855 19 42699211 to 42699615 404 CpG island CpG island 10855
Gm25216 19 42699777 to 42699902 125 - snoRNA gene predicted gene, 25216
Pyroxd2 19 42725858 to 42752775 26917 - protein coding gene pyridine nucleotide-disulphide oxidoreductase domain 2
Gm19437 19 42745691 to 42752329 6638 + lncRNA gene predicted gene, 19437
Tssr156505 19 42745804 to 42745815 11 + TSS region transcription start site region 156505
Cpgi10856 19 42752214 to 42752498 284 CpG island CpG island 10856
Tssr159364 19 42752459 to 42752517 58 - TSS region transcription start site region 159364
Tssr159365 19 42752710 to 42752721 11 - TSS region transcription start site region 159365
Hps1 19 42755191 to 42779996 24805 - protein coding gene HPS1, biogenesis of lysosomal organelles complex 3 subunit 1
Tssr159366 19 42767488 to 42767498 10 - TSS region transcription start site region 159366
Gm16244 19 42779032 to 42781454 2422 + lncRNA gene predicted gene 16244
Cpgi10857 19 42779605 to 42780317 712 CpG island CpG island 10857
Tssr159367 19 42779936 to 42779985 49 - TSS region transcription start site region 159367
Hpse2 19 42788947 to 43388311 599364 - protein coding gene heparanase 2
Cpgi10858 19 42795099 to 42795644 545 CpG island CpG island 10858
D19Dcr32 19 42975388 to 42975491 103 DNA segment DNA Segment, Chr 19, Derry C. Roopenian 32
Tssr156506 19 43034945 to 43034956 11 + TSS region transcription start site region 156506
Tssr159368 19 43112411 to 43112412 1 - TSS region transcription start site region 159368
Gm22135 19 43160795 to 43160902 107 - rRNA gene predicted gene, 22135
Tssr159369 19 43248057 to 43248061 4 - TSS region transcription start site region 159369
Gm18379 19 43278429 to 43279303 874 - pseudogene predicted gene, 18379
Tssr156507 19 43280774 to 43280789 15 + TSS region transcription start site region 156507
Gm6776 19 43280798 to 43281697 899 + pseudogene predicted pseudogene 6776
Tssr156508 19 43281223 to 43281245 22 + TSS region transcription start site region 156508