Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:42238037-42476783

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tlsr8 19 25158638 to 42400477 17241839 QTL thymic lymphoma suppressor region 8
Tssr156490 19 42238613 to 42238624 11 + TSS region transcription start site region 156490
Tssr156491 19 42247544 to 42247586 42 + TSS region transcription start site region 156491
Golga7b 19 42247578 to 42270348 22770 + protein coding gene golgi autoantigen, golgin subfamily a, 7B
Tssr156492 19 42255241 to 42255245 4 + TSS region transcription start site region 156492
Cpgi10848 19 42255449 to 42256420 971 CpG island CpG island 10848
Tssr156493 19 42255704 to 42255761 57 + TSS region transcription start site region 156493
Tssr156494 19 42255814 to 42255867 53 + TSS region transcription start site region 156494
Tssr156495 19 42255872 to 42255889 17 + TSS region transcription start site region 156495
Tssr156496 19 42255890 to 42255903 13 + TSS region transcription start site region 156496
Cpgi10849 19 42268265 to 42268654 389 CpG island CpG island 10849
Tssr156497 19 42268688 to 42268692 4 + TSS region transcription start site region 156497
Gm26339 19 42274964 to 42275062 98 + miRNA gene predicted gene, 26339
Gm34347 19 42276887 to 42314626 37739 + lncRNA gene predicted gene, 34347
Mir3085 19 42280082 to 42280170 88 - miRNA gene microRNA 3085
Crtac1 19 42283037 to 42431783 148746 - protein coding gene cartilage acidic protein 1
Tssr159356 19 42298076 to 42298093 17 - TSS region transcription start site region 159356
Tssr156498 19 42306465 to 42306497 32 + TSS region transcription start site region 156498
Tssr159357 19 42307102 to 42307116 14 - TSS region transcription start site region 159357
Tssr5521 19 42307125 to 42307134 9 - TSS region transcription start site region 5521
Cpgi10850 19 42380636 to 42381173 537 CpG island CpG island 10850
Gm41848 19 42387741 to 42397551 9810 - lncRNA gene predicted gene, 41848
D19Mit11.2 19 42394597 to 42394760 163 DNA segment DNA segment, Chr 19, Massachusetts Institute of Technology 11.2
D19Mit11.1 19 42394609 to 42394755 146 DNA segment DNA segment, Chr 19, Massachusetts Institute of Technology 11.1
D19Mit100 19 42400324 to 42400477 153 DNA segment DNA segment, Chr 19, Massachusetts Institute of Technology 100
Gm34299 19 42402212 to 42413934 11722 + lncRNA gene predicted gene, 34299
Cpgi10851 19 42409248 to 42409459 211 CpG island CpG island 10851
Cpgi10852 19 42430975 to 42432810 1835 CpG island CpG island 10852
Tssr159358 19 42431747 to 42431760 13 - TSS region transcription start site region 159358
Tssr159359 19 42431778 to 42431792 14 - TSS region transcription start site region 159359
D19Mit120 19 42438478 to 42438566 88 DNA segment DNA Segment, Chr 19 Massachusetts Institute of Technology 120
Ath16 19 42438478 to 42438566 88 QTL atherosclerosis 16
Gm41849 19 42444057 to 42448376 4319 + lncRNA gene predicted gene, 41849