Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:4208785-4268788

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi10392 19 4214154 to 4215713 1559 CpG island CpG island 10392
Clcf1 19 4214238 to 4223490 9252 + protein coding gene cardiotrophin-like cytokine factor 1
Gm45928 19 4214238 to 4233634 19396 + lncRNA gene predicted gene, 45928
Tssr154300 19 4214351 to 4214363 12 + TSS region transcription start site region 154300
Tssr154301 19 4214367 to 4214375 8 + TSS region transcription start site region 154301
Tssr154302 19 4214383 to 4214397 14 + TSS region transcription start site region 154302
Tssr154303 19 4214416 to 4214432 16 + TSS region transcription start site region 154303
Gm26115 19 4215402 to 4215488 86 - miRNA gene predicted gene, 26115
Tssr154304 19 4215832 to 4215847 15 + TSS region transcription start site region 154304
Tssr157472 19 4216095 to 4216110 15 - TSS region transcription start site region 157472
Tssr5404 19 4231612 to 4231657 45 - TSS region transcription start site region 5404
Cpgi10393 19 4231726 to 4231937 211 CpG island CpG island 10393
Pold4 19 4231899 to 4233631 1732 + protein coding gene polymerase (DNA-directed), delta 4
Tssr154305 19 4231910 to 4231928 18 + TSS region transcription start site region 154305
Tssr154306 19 4231931 to 4231959 28 + TSS region transcription start site region 154306
Tssr154307 19 4231961 to 4231977 16 + TSS region transcription start site region 154307
Tssr154308 19 4231989 to 4232000 11 + TSS region transcription start site region 154308
Tssr154309 19 4232408 to 4232425 17 + TSS region transcription start site region 154309
Tssr154310 19 4232435 to 4232479 44 + TSS region transcription start site region 154310
Tssr154311 19 4232783 to 4232804 21 + TSS region transcription start site region 154311
Tssr154312 19 4237020 to 4237021 1 + TSS region transcription start site region 154312
Tssr5405 19 4238785 to 4238788 3 + TSS region transcription start site region 5405
Cpgi10394 19 4257211 to 4258017 806 CpG island CpG island 10394
Tssr157473 19 4257604 to 4257611 7 - TSS region transcription start site region 157473
Tssr157474 19 4257623 to 4257644 21 - TSS region transcription start site region 157474
Ssh3 19 4261668 to 4269172 7504 - protein coding gene slingshot protein phosphatase 3
Tssr5406 19 4262516 to 4262517 1 + TSS region transcription start site region 5406
Mir6985 19 4263818 to 4263878 60 - miRNA gene microRNA 6985
Cpgi10395 19 4268741 to 4269442 701 CpG island CpG island 10395