Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:3986712-4086740

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48 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Acy3 19 3986661 to 3990007 3346 + protein coding gene aspartoacylase (aminoacylase) 3
Tssr154246 19 3988339 to 3988347 8 + TSS region transcription start site region 154246
Tbx10 19 3992752 to 3999511 6759 + protein coding gene T-box 10
4833408A19Rik 19 3999548 to 4000541 993 unclassified gene RIKEN cDNA 4833408A19 gene
Cpgi10379 19 3999883 to 4001239 1356 CpG island CpG island 10379
Tssr154247 19 4000395 to 4000430 35 + TSS region transcription start site region 154247
Nudt8 19 4000580 to 4002102 1522 + protein coding gene nudix (nucleoside diphosphate linked moiety X)-type motif 8
Tssr154248 19 4000582 to 4000659 77 + TSS region transcription start site region 154248
Gm49405 19 4000626 to 4005816 5190 + protein coding gene predicted gene, 49405
Gm16312 19 4000758 to 4001232 474 - antisense lncRNA gene predicted gene 16312
Tssr154249 19 4003290 to 4003333 43 + TSS region transcription start site region 154249
Tssr154250 19 4003334 to 4003366 32 + TSS region transcription start site region 154250
Tssr154251 19 4003368 to 4003385 17 + TSS region transcription start site region 154251
Doc2g 19 4003385 to 4007005 3620 + protein coding gene double C2, gamma
Tssr154252 19 4003408 to 4003418 10 + TSS region transcription start site region 154252
Ndufv1 19 4007499 to 4012755 5256 - protein coding gene NADH:ubiquinone oxidoreductase core subunit V1
Cpgi10380 19 4012227 to 4013047 820 CpG island CpG island 10380
Tssr157432 19 4012656 to 4012736 80 - TSS region transcription start site region 157432
Tssr157433 19 4012738 to 4012749 11 - TSS region transcription start site region 157433
Gstp1 19 4035411 to 4037912 2501 - protein coding gene glutathione S-transferase, pi 1
Tssr157434 19 4036712 to 4036740 28 - TSS region transcription start site region 157434
Tssr157435 19 4036813 to 4036825 12 - TSS region transcription start site region 157435
Cpgi10381 19 4037759 to 4038096 337 CpG island CpG island 10381
Tssr5401 19 4037892 to 4037906 14 - TSS region transcription start site region 5401
Tssr157436 19 4037910 to 4037933 23 - TSS region transcription start site region 157436
Tssr157437 19 4037944 to 4037959 15 - TSS region transcription start site region 157437
Tssr5402 19 4038048 to 4038068 20 - TSS region transcription start site region 5402
Gstp2 19 4040288 to 4042221 1933 - protein coding gene glutathione S-transferase, pi 2
Tssr157438 19 4042230 to 4042242 12 - TSS region transcription start site region 157438
Tssr157439 19 4042243 to 4042273 30 - TSS region transcription start site region 157439
Tssr154253 19 4046472 to 4046481 9 + TSS region transcription start site region 154253
Tssr154254 19 4047063 to 4047070 7 + TSS region transcription start site region 154254
Gstp3 19 4057477 to 4059446 1969 - protein coding gene glutathione S-transferase pi 3
Tssr157440 19 4059037 to 4059061 24 - TSS region transcription start site region 157440
Tssr157441 19 4059077 to 4059099 22 - TSS region transcription start site region 157441
Tssr157442 19 4059449 to 4059476 27 - TSS region transcription start site region 157442
Tssr157443 19 4064095 to 4064099 4 - TSS region transcription start site region 157443
Tssr154255 19 4066410 to 4066425 15 + TSS region transcription start site region 154255
Gm42060 19 4067251 to 4071445 4194 - lncRNA gene predicted gene, 42060
Tssr157444 19 4069089 to 4069112 23 - TSS region transcription start site region 157444
Tssr157445 19 4069225 to 4069239 14 - TSS region transcription start site region 157445
Gm23927 19 4078298 to 4078512 214 - snoRNA gene predicted gene, 23927
Tssr154256 19 4081434 to 4081467 33 + TSS region transcription start site region 154256
Tssr154257 19 4081565 to 4081583 18 + TSS region transcription start site region 154257
Cabp2 19 4081578 to 4087340 5762 + protein coding gene calcium binding protein 2
Tssr154258 19 4082473 to 4082517 44 + TSS region transcription start site region 154258
Tssr154259 19 4082518 to 4082533 15 + TSS region transcription start site region 154259
Tssr154260 19 4082539 to 4082545 6 + TSS region transcription start site region 154260