Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:3912328-4041645

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90 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ndufs8 19 3908870 to 3912717 3847 - protein coding gene NADH:ubiquinone oxidoreductase core subunit S8
Cpgi10376 19 3912340 to 3913151 811 CpG island CpG island 10376
Tssr157422 19 3912711 to 3912722 11 - TSS region transcription start site region 157422
Tssr157423 19 3912733 to 3912779 46 - TSS region transcription start site region 157423
Tssr154204 19 3913041 to 3913059 18 + TSS region transcription start site region 154204
Aldh3b1 19 3913493 to 3929761 16268 - protein coding gene aldehyde dehydrogenase 3 family, member B1
Tssr157424 19 3914685 to 3914718 33 - TSS region transcription start site region 157424
Tssr157425 19 3918677 to 3918711 34 - TSS region transcription start site region 157425
Gm42059 19 3919391 to 3920826 1435 + lncRNA gene predicted gene, 42059
Gm29846 19 3923864 to 3924975 1111 + lncRNA gene predicted gene, 29846
Tssr157426 19 3929723 to 3929765 42 - TSS region transcription start site region 157426
Tssr157427 19 3929767 to 3929783 16 - TSS region transcription start site region 157427
Tssr157428 19 3930802 to 3930814 12 - TSS region transcription start site region 157428
Tssr157429 19 3931792 to 3931835 43 - TSS region transcription start site region 157429
Tssr154205 19 3933473 to 3933484 11 + TSS region transcription start site region 154205
Unc93b1 19 3935186 to 3949340 14154 + protein coding gene unc-93 homolog B1, TLR signaling regulator
Tssr154206 19 3935203 to 3935247 44 + TSS region transcription start site region 154206
Tssr154207 19 3935252 to 3935261 9 + TSS region transcription start site region 154207
Tssr154208 19 3935471 to 3935483 12 + TSS region transcription start site region 154208
Cpgi10377 19 3935660 to 3936472 812 CpG island CpG island 10377
Tssr154209 19 3935768 to 3935787 19 + TSS region transcription start site region 154209
Tssr154210 19 3935793 to 3935838 45 + TSS region transcription start site region 154210
Tssr157430 19 3935800 to 3935815 15 - TSS region transcription start site region 157430
Tssr154211 19 3936066 to 3936091 25 + TSS region transcription start site region 154211
Tssr154212 19 3936092 to 3936103 11 + TSS region transcription start site region 154212
Tssr154213 19 3936253 to 3936353 100 + TSS region transcription start site region 154213
Tssr154214 19 3936354 to 3936391 37 + TSS region transcription start site region 154214
Tssr154215 19 3936679 to 3936696 17 + TSS region transcription start site region 154215
Tssr154216 19 3937046 to 3937091 45 + TSS region transcription start site region 154216
Tssr154217 19 3938161 to 3938201 40 + TSS region transcription start site region 154217
Tssr154218 19 3941522 to 3941533 11 + TSS region transcription start site region 154218
Tssr154219 19 3941548 to 3941557 9 + TSS region transcription start site region 154219
Tssr154220 19 3941587 to 3941601 14 + TSS region transcription start site region 154220
Tssr154221 19 3941623 to 3941646 23 + TSS region transcription start site region 154221
Tssr154222 19 3941866 to 3941877 11 + TSS region transcription start site region 154222
Tssr154223 19 3941894 to 3941911 17 + TSS region transcription start site region 154223
Tssr154224 19 3941919 to 3941928 9 + TSS region transcription start site region 154224
Tssr154225 19 3941932 to 3941946 14 + TSS region transcription start site region 154225
Tssr154226 19 3941950 to 3941971 21 + TSS region transcription start site region 154226
Tssr154227 19 3942368 to 3942398 30 + TSS region transcription start site region 154227
Tssr157431 19 3942390 to 3942450 60 - TSS region transcription start site region 157431
Cpgi10378 19 3942714 to 3943667 953 CpG island CpG island 10378
Tssr154228 19 3943501 to 3943517 16 + TSS region transcription start site region 154228
Tssr154229 19 3943586 to 3943610 24 + TSS region transcription start site region 154229
Tssr154230 19 3944146 to 3944171 25 + TSS region transcription start site region 154230
Tssr154231 19 3947036 to 3947055 19 + TSS region transcription start site region 154231
Tssr154232 19 3947068 to 3947093 25 + TSS region transcription start site region 154232
Tssr154233 19 3948620 to 3948680 60 + TSS region transcription start site region 154233
Tssr154234 19 3948773 to 3948785 12 + TSS region transcription start site region 154234
Tssr154235 19 3948859 to 3948871 12 + TSS region transcription start site region 154235
Tssr154236 19 3949013 to 3949042 29 + TSS region transcription start site region 154236
Aldh3b3 19 3958645 to 3972103 13458 + protein coding gene aldehyde dehydrogenase 3 family, member B3
Tssr154237 19 3958803 to 3958832 29 + TSS region transcription start site region 154237
Tssr154238 19 3964330 to 3964344 14 + TSS region transcription start site region 154238
Tssr154239 19 3972322 to 3972345 23 + TSS region transcription start site region 154239
Aldh3b2 19 3972328 to 3981645 9317 + protein coding gene aldehyde dehydrogenase 3 family, member B2
Tssr154240 19 3972423 to 3972433 10 + TSS region transcription start site region 154240
Tssr154241 19 3972437 to 3972468 31 + TSS region transcription start site region 154241
Tssr154242 19 3972475 to 3972503 28 + TSS region transcription start site region 154242
Tssr154243 19 3972507 to 3972566 59 + TSS region transcription start site region 154243
Tssr154244 19 3979984 to 3980016 32 + TSS region transcription start site region 154244
Tssr154245 19 3986564 to 3986579 15 + TSS region transcription start site region 154245
Acy3 19 3986661 to 3990007 3346 + protein coding gene aspartoacylase (aminoacylase) 3
Tssr154246 19 3988339 to 3988347 8 + TSS region transcription start site region 154246
Tbx10 19 3992752 to 3999511 6759 + protein coding gene T-box 10
4833408A19Rik 19 3999548 to 4000541 993 unclassified gene RIKEN cDNA 4833408A19 gene
Cpgi10379 19 3999883 to 4001239 1356 CpG island CpG island 10379
Tssr154247 19 4000395 to 4000430 35 + TSS region transcription start site region 154247
Nudt8 19 4000580 to 4002102 1522 + protein coding gene nudix (nucleoside diphosphate linked moiety X)-type motif 8
Tssr154248 19 4000582 to 4000659 77 + TSS region transcription start site region 154248
Gm49405 19 4000626 to 4005816 5190 + protein coding gene predicted gene, 49405
Gm16312 19 4000758 to 4001232 474 - antisense lncRNA gene predicted gene 16312
Tssr154249 19 4003290 to 4003333 43 + TSS region transcription start site region 154249
Tssr154250 19 4003334 to 4003366 32 + TSS region transcription start site region 154250
Tssr154251 19 4003368 to 4003385 17 + TSS region transcription start site region 154251
Doc2g 19 4003385 to 4007005 3620 + protein coding gene double C2, gamma
Tssr154252 19 4003408 to 4003418 10 + TSS region transcription start site region 154252
Ndufv1 19 4007499 to 4012755 5256 - protein coding gene NADH:ubiquinone oxidoreductase core subunit V1
Cpgi10380 19 4012227 to 4013047 820 CpG island CpG island 10380
Tssr157432 19 4012656 to 4012736 80 - TSS region transcription start site region 157432
Tssr157433 19 4012738 to 4012749 11 - TSS region transcription start site region 157433
Gstp1 19 4035411 to 4037912 2501 - protein coding gene glutathione S-transferase, pi 1
Tssr157434 19 4036712 to 4036740 28 - TSS region transcription start site region 157434
Tssr157435 19 4036813 to 4036825 12 - TSS region transcription start site region 157435
Cpgi10381 19 4037759 to 4038096 337 CpG island CpG island 10381
Tssr5401 19 4037892 to 4037906 14 - TSS region transcription start site region 5401
Tssr157436 19 4037910 to 4037933 23 - TSS region transcription start site region 157436
Tssr157437 19 4037944 to 4037959 15 - TSS region transcription start site region 157437
Tssr5402 19 4038048 to 4038068 20 - TSS region transcription start site region 5402
Gstp2 19 4040288 to 4042221 1933 - protein coding gene glutathione S-transferase, pi 2