Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:3277581-3477620

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40 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ighmbp2 19 3260924 to 3283017 22093 - protein coding gene immunoglobulin mu binding protein 2
Lfp3 19 3278551 to 3278703 152 QTL long free running period 3
D19Mit32 19 3278551 to 3278703 152 DNA segment DNA segment, Chr 19, Massachusetts Institute of Technology 32
Cpgi10362 19 3282485 to 3283360 875 CpG island CpG island 10362
Tssr157382 19 3282801 to 3282853 52 - TSS region transcription start site region 157382
Mrpl21 19 3282920 to 3292837 9917 + protein coding gene mitochondrial ribosomal protein L21
Tssr157383 19 3282958 to 3283048 90 - TSS region transcription start site region 157383
Tssr154174 19 3283035 to 3283071 36 + TSS region transcription start site region 154174
Mir6984 19 3288920 to 3288983 63 + miRNA gene microRNA 6984
Tssr154175 19 3322292 to 3322315 23 + TSS region transcription start site region 154175
Cpgi10363 19 3322484 to 3322816 332 CpG island CpG island 10363
Cpgi10364 19 3322884 to 3324237 1353 CpG island CpG island 10364
Cpt1a 19 3323301 to 3385732 62431 + protein coding gene carnitine palmitoyltransferase 1a, liver
Tssr154176 19 3323327 to 3323339 12 + TSS region transcription start site region 154176
Tssr154177 19 3323340 to 3323353 13 + TSS region transcription start site region 154177
Tssr157384 19 3323720 to 3323721 1 - TSS region transcription start site region 157384
Cpgi10365 19 3324931 to 3325851 920 CpG island CpG island 10365
Tssr154178 19 3325686 to 3325690 4 + TSS region transcription start site region 154178
Tssr154179 19 3352500 to 3352516 16 + TSS region transcription start site region 154179
Gm36532 19 3373448 to 3378102 4654 - lncRNA gene predicted gene, 36532
Tssr154180 19 3376383 to 3376420 37 + TSS region transcription start site region 154180
Tssr154181 19 3377581 to 3377620 39 + TSS region transcription start site region 154181
Tssr5398 19 3377631 to 3377641 10 + TSS region transcription start site region 5398
Tssr154182 19 3384678 to 3384682 4 + TSS region transcription start site region 154182
4833417J20Rik 19 3386210 to 3387995 1785 unclassified gene RIKEN cDNA 4833417J20 gene
Cpgi10366 19 3388563 to 3389698 1135 CpG island CpG island 10366
Tssr157385 19 3388643 to 3388650 7 - TSS region transcription start site region 157385
Tssr157386 19 3388652 to 3388665 13 - TSS region transcription start site region 157386
Tesmin 19 3388857 to 3407823 18966 + protein coding gene testis expressed metallothionein like
Tssr154183 19 3388861 to 3388904 43 + TSS region transcription start site region 154183
Tssr154184 19 3388922 to 3388931 9 + TSS region transcription start site region 154184
Tssr157387 19 3389188 to 3389244 56 - TSS region transcription start site region 157387
Gal 19 3409917 to 3414457 4540 - protein coding gene galanin
Cpgi10367 19 3413954 to 3414827 873 CpG island CpG island 10367
Tssr157388 19 3414464 to 3414481 17 - TSS region transcription start site region 157388
Tssr157389 19 3440890 to 3440907 17 - TSS region transcription start site region 157389
Tssr157390 19 3441265 to 3441276 11 - TSS region transcription start site region 157390
Tssr157391 19 3441286 to 3441304 18 - TSS region transcription start site region 157391
Ppp6r3 19 3454928 to 3575749 120821 - protein coding gene protein phosphatase 6, regulatory subunit 3
Tgct2 19 20562299 to 3278551 -17283748 QTL testicular germ cell tumor 2