Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:12757487-16075950

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178 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm44505 19 12763528 to 12796123 32595 - lncRNA gene predicted readthrough transcript (NMD candidate), 44505
Cntf 19 12763660 to 12765632 1972 - protein coding gene ciliary neurotrophic factor
Tssr158445 19 12765418 to 12765443 25 - TSS region transcription start site region 158445
Tssr158446 19 12765447 to 12765485 38 - TSS region transcription start site region 158446
Zfp91 19 12766939 to 12796123 29184 - protein coding gene zinc finger protein 91
Tssr158447 19 12767754 to 12767758 4 - TSS region transcription start site region 158447
Tssr158448 19 12792160 to 12792163 3 - TSS region transcription start site region 158448
Cpgi10644 19 12794614 to 12796783 2169 CpG island CpG island 10644
Tssr155355 19 12794961 to 12795000 39 + TSS region transcription start site region 155355
Tssr158449 19 12795014 to 12795050 36 - TSS region transcription start site region 158449
Tssr158450 19 12795366 to 12795377 11 - TSS region transcription start site region 158450
Tssr158451 19 12795424 to 12795465 41 - TSS region transcription start site region 158451
Tssr158452 19 12795481 to 12795497 16 - TSS region transcription start site region 158452
Tssr158453 19 12795516 to 12795567 51 - TSS region transcription start site region 158453
Tssr155356 19 12795722 to 12795732 10 + TSS region transcription start site region 155356
Tssr155357 19 12795868 to 12795897 29 + TSS region transcription start site region 155357
Tssr155358 19 12795898 to 12795911 13 + TSS region transcription start site region 155358
Tssr158454 19 12796108 to 12796146 38 - TSS region transcription start site region 158454
Tssr158455 19 12796554 to 12796568 14 - TSS region transcription start site region 158455
Tssr158456 19 12796574 to 12796605 31 - TSS region transcription start site region 158456
Tssr155359 19 12798574 to 12798589 15 + TSS region transcription start site region 155359
Lpxn 19 12798606 to 12833807 35201 + protein coding gene leupaxin
Tssr155360 19 12798624 to 12798636 12 + TSS region transcription start site region 155360
Tssr155361 19 12801360 to 12801374 14 + TSS region transcription start site region 155361
Tssr155362 19 12804709 to 12804720 11 + TSS region transcription start site region 155362
Tssr155363 19 12804858 to 12804874 16 + TSS region transcription start site region 155363
Tssr155364 19 12804876 to 12804887 11 + TSS region transcription start site region 155364
Tssr155365 19 12805288 to 12805335 47 + TSS region transcription start site region 155365
Tssr155366 19 12805348 to 12805380 32 + TSS region transcription start site region 155366
Tssr155367 19 12806200 to 12806231 31 + TSS region transcription start site region 155367
Tssr155368 19 12827957 to 12827971 14 + TSS region transcription start site region 155368
Tssr155369 19 12846774 to 12846781 7 + TSS region transcription start site region 155369
Gm5244 19 12846804 to 12847248 444 + pseudogene predicted pseudogene 5244
Olfr1444 19 12861777 to 12862736 959 + protein coding gene olfactory receptor 1444
Olfr1445 19 12883883 to 12884827 944 + protein coding gene olfactory receptor 1445
Olfr1446 19 12889649 to 12890575 926 - protein coding gene olfactory receptor 1446
Olfr1447 19 12900808 to 12903730 2922 - protein coding gene olfactory receptor 1447
Gm5512 19 12905320 to 12906841 1521 + pseudogene predicted gene 5512
Olfr1448 19 12919363 to 12920307 944 - protein coding gene olfactory receptor 1448
Olfr1449 19 12934740 to 12935684 944 + protein coding gene olfactory receptor 1449
Olfr1450 19 12953591 to 12954568 977 + protein coding gene olfactory receptor 1450
Olfr1451 19 12995189 to 12999920 4731 + protein coding gene olfactory receptor 1451
Gm19132 19 13011704 to 13012668 964 - pseudogene predicted gene, 19132
Olfr1452-ps1 19 13016225 to 13017146 921 + polymorphic pseudogene olfactory receptor 1452, pseudogene 1
Olfr1453 19 13027404 to 13028327 923 - protein coding gene olfactory receptor 1453
Tssr155370 19 13054773 to 13054829 56 + TSS region transcription start site region 155370
Olfr1454 19 13063413 to 13064336 923 + protein coding gene olfactory receptor 1454
Olfr1455-ps1 19 13068907 to 13069677 770 + pseudogene olfactory receptor 1455, pseudogene 1
Olfr1456-ps1 19 13078818 to 13079335 517 - pseudogene olfactory receptor 1456, pseudogene 1
Olfr1457 19 13094693 to 13095646 953 - protein coding gene olfactory receptor 1457
Olfr1458 19 13102379 to 13106693 4314 - protein coding gene olfactory receptor 1458
Olfr1459 19 13145734 to 13146657 923 - protein coding gene olfactory receptor 1459
Olfr1460-ps1 19 13158200 to 13159316 1116 + pseudogene olfactory receptor 1460, pseudogene 1
Olfr1461 19 13163098 to 13165954 2856 + protein coding gene olfactory receptor 1461
Olfr1462 19 13185734 to 13191592 5858 + protein coding gene olfactory receptor 1462
Olfr1463 19 13234252 to 13235184 932 + protein coding gene olfactory receptor 1463
Olfr1464-ps1 19 13282134 to 13283056 922 - polymorphic pseudogene olfactory receptor 1464, pseudogene 1
Gm22443 19 13301001 to 13301107 106 - snRNA gene predicted gene, 22443
Olfr1465 19 13313360 to 13314283 923 - protein coding gene olfactory receptor 1465
Olfr1466 19 13338901 to 13342785 3884 + protein coding gene olfactory receptor 1466
Olfr1467 19 13364630 to 13365556 926 + protein coding gene olfactory receptor 1467
Olfr1468-ps1 19 13374964 to 13375885 921 + polymorphic pseudogene olfactory receptor 1468, pseudogene 1
Gm44849 19 13403157 to 13403640 483 + pseudogene predicted gene 44849
Olfr1469 19 13410571 to 13411500 929 + protein coding gene olfactory receptor 1469
Olfr1470-ps1 19 13434155 to 13435095 940 - pseudogene olfactory receptor 1470, pseudogene 1
Olfr1471 19 13445014 to 13445958 944 + protein coding gene olfactory receptor 1471
Olfr1472 19 13453571 to 13454515 944 - protein coding gene olfactory receptor 1472
Olfr1473-ps1 19 13462681 to 13463635 954 - pseudogene olfactory receptor 1473, pseudogene 1
Olfr1474 19 13470972 to 13471916 944 + protein coding gene olfactory receptor 1474
Olfr1475 19 13479252 to 13480196 944 - protein coding gene olfactory receptor 1475
Olfr1476-ps1 19 13488351 to 13488717 366 + pseudogene olfactory receptor 1476, pseudogene 1
Olfr1477 19 13500546 to 13503292 2746 + protein coding gene olfactory receptor 1477
Olfr1478-ps1 19 13505412 to 13505709 297 + pseudogene olfactory receptor 1478, pseudogene 1
Olfr1479-ps1 19 13511526 to 13511907 381 + pseudogene olfactory receptor 1479, pseudogene 1
Gm3188 19 13512553 to 13514011 1458 - pseudogene predicted gene 3188
Olfr1480 19 13527924 to 13530622 2698 + protein coding gene olfactory receptor 1480
Olfr1481-ps1 19 13535390 to 13535523 133 + pseudogene olfactory receptor 1481, pseudogene 1
Olfr1482-ps1 19 13563061 to 13563213 152 - pseudogene olfactory receptor 1482, pseudogene 1
Olfr1483-ps1 19 13566801 to 13567134 333 + pseudogene olfactory receptor 1483, pseudogene 1
Olfr1484 19 13583556 to 13586420 2864 + protein coding gene olfactory receptor 1484
Olfr1485-ps1 19 13588298 to 13588658 360 + pseudogene olfactory receptor 1485, pseudogene 1
Olfr1486-ps1 19 13593996 to 13594215 219 + pseudogene olfactory receptor 1486, pseudogene 1
Gm9538 19 13595018 to 13596063 1045 - pseudogene predicted gene 9538
Gm22323 19 13599660 to 13599768 108 - miRNA gene predicted gene, 22323
Gm23931 19 13604999 to 13605107 108 - miRNA gene predicted gene, 23931
Olfr1487 19 13619164 to 13620111 947 + protein coding gene olfactory receptor 1487
Olfr1488-ps1 19 13625625 to 13625760 135 + pseudogene olfactory receptor 1488, pseudogene 1
Olfr1489 19 13633113 to 13634054 941 + protein coding gene olfactory receptor 1489
Gm24124 19 13635583 to 13635714 131 - snoRNA gene predicted gene, 24124
Olfr1490 19 13654446 to 13655396 950 + protein coding gene olfactory receptor 1490
Olfr1491 19 13704829 to 13705788 959 + protein coding gene olfactory receptor 1491
Olfr1492-ps1 19 13718016 to 13718845 829 + pseudogene olfactory receptor 1492, pseudogene 1
Olfr1493-ps1 19 13726224 to 13727213 989 + pseudogene olfactory receptor 1493, pseudogene 1
D19Mit31 19 13745985 to 13746114 129 DNA segment DNA segment, Chr 19, Massachusetts Institute of Technology 31
Olfr1494 19 13749108 to 13750055 947 + protein coding gene olfactory receptor 1494
Olfr1495 19 13768344 to 13769303 959 + protein coding gene olfactory receptor 1495
Olfr1496 19 13780548 to 13781614 1066 + protein coding gene olfactory receptor 1496
Gm19218 19 13791965 to 13792514 549 + pseudogene predicted gene, 19218
Olfr1497 19 13794665 to 13795609 944 - protein coding gene olfactory receptor 1497
Olfr1498-ps1 19 13804431 to 13805376 945 - pseudogene olfactory receptor 1498, pseudogene 1
Olfr1499 19 13814644 to 13815588 944 - protein coding gene olfactory receptor 1499
Olfr1500 19 13827459 to 13828394 935 - protein coding gene olfactory receptor 1500
Olfr1501 19 13838224 to 13839171 947 - protein coding gene olfactory receptor 1501
Olfr1502 19 13861795 to 13862745 950 + protein coding gene olfactory receptor 1502
Olfr1503-ps1 19 13877451 to 13878253 802 + pseudogene olfactory receptor 1503, pseudogene 1
Olfr1504 19 13887261 to 13897928 10667 - protein coding gene olfactory receptor 1504
Olfr1505 19 13919022 to 13919972 950 + protein coding gene olfactory receptor 1505
D19Mit69 19 13933448 to 13933583 135 DNA segment DNA segment, Chr 19, Massachusetts Institute of Technology 69
Vmn2r-ps135 19 13938563 to 13939288 725 + pseudogene vomeronasal 2, receptor, pseudogene 135
Gm26993 19 14017583 to 14018371 788 - pseudogene predicted gene, 26993
D19Dcr75 19 14083055 to 14083150 95 DNA segment DNA Segment, Chr 19, Derry C. Roopenian 75
Tssr158457 19 14083436 to 14083440 4 - TSS region transcription start site region 158457
4930504B16Rik 19 14083630 to 14084377 747 unclassified gene RIKEN cDNA 4930504B16 gene
Gm31331 19 14090247 to 14096731 6484 - lncRNA gene predicted gene, 31331
D19Dcr76 19 14091947 to 14092042 95 DNA segment DNA Segment, Chr 19, Derry C. Roopenian 76
Tssr5451 19 14243429 to 14243433 4 - TSS region transcription start site region 5451
Gm8630 19 14397487 to 14435950 38463 - unclassified gene predicted gene 8630
Tle4 19 14448072 to 14598051 149979 - protein coding gene transducin-like enhancer of split 4
Tssr158458 19 14494196 to 14494200 4 - TSS region transcription start site region 158458
Tssr158459 19 14543400 to 14543405 5 - TSS region transcription start site region 158459
D19Mit116 19 14562940 to 14563062 122 DNA segment DNA Segment, Chr 19 Massachusetts Institute of Technology 116
Gm31441 19 14564458 to 14566993 2535 + lncRNA gene predicted gene, 31441
Cpgi10645 19 14596841 to 14599303 2462 CpG island CpG island 10645
Tssr158460 19 14597148 to 14597173 25 - TSS region transcription start site region 158460
Tssr158461 19 14597697 to 14597722 25 - TSS region transcription start site region 158461
Tssr158462 19 14597733 to 14597749 16 - TSS region transcription start site region 158462
Tssr158463 19 14597757 to 14597795 38 - TSS region transcription start site region 158463
Tssr158464 19 14598005 to 14598016 11 - TSS region transcription start site region 158464
Tssr158465 19 14598031 to 14598088 57 - TSS region transcription start site region 158465
Tssr158466 19 14598191 to 14598202 11 - TSS region transcription start site region 158466
Tssr155371 19 14598522 to 14598573 51 + TSS region transcription start site region 155371
Gm37997 19 14658667 to 14658933 266 + unclassified gene predicted gene, 37997
Tssr155372 19 14664371 to 14664407 36 + TSS region transcription start site region 155372
Tssr158467 19 14679861 to 14679888 27 - TSS region transcription start site region 158467
D19Mit95 19 14714219 to 14714317 98 DNA segment DNA segment, Chr 19, Massachusetts Institute of Technology 95
Gm26026 19 14718358 to 14718480 122 - snRNA gene predicted gene, 26026
Tssr155373 19 14834711 to 14834718 7 + TSS region transcription start site region 155373
Tssr5452 19 14904646 to 14904653 7 + TSS region transcription start site region 5452
Cpgi10646 19 14957779 to 14958011 232 CpG island CpG island 10646
Gm5513 19 14959549 to 14960766 1217 - pseudogene predicted pseudogene 5513
Tssr158468 19 14960781 to 14960784 3 - TSS region transcription start site region 158468
Gm7159 19 15193521 to 15194233 712 - pseudogene predicted gene 7159
Tssr158469 19 15194232 to 15194234 2 - TSS region transcription start site region 158469
Gm46645 19 15290167 to 15340387 50220 - lncRNA gene predicted gene, 46645
Datd 19 15362335 to 15362870 535 QTL dopamine transporter density
Pomc-ps1 19 15362335 to 15362870 535 + pseudogene pro-opiomelanocortin, pseudogene 1
Cpgi10647 19 15362349 to 15362655 306 CpG island CpG island 10647
Selenok-ps3 19 15458964 to 15459672 708 - pseudogene selenoprotein K, pseudogene 3
D19Mit61 19 15524672 to 15524799 127 DNA segment DNA segment, Chr 19, Massachusetts Institute of Technology 61
Gm31594 19 15599131 to 15632101 32970 + lncRNA gene predicted gene, 31594
Tssr155374 19 15599200 to 15599220 20 + TSS region transcription start site region 155374
Tssr155375 19 15599252 to 15599256 4 + TSS region transcription start site region 155375
Gm46665 19 15636548 to 15662923 26375 + lncRNA gene predicted gene, 46665
Gm31733 19 15659946 to 15664346 4400 - lncRNA gene predicted gene, 31733
Gm24319 19 15680004 to 15680110 106 + snRNA gene predicted gene, 24319
Cpgi10648 19 15802048 to 15802253 205 CpG island CpG island 10648
D19Mit28 19 15897664 to 15897810 146 DNA segment DNA segment, Chr 19, Massachusetts Institute of Technology 28
Pbctlp1 19 15897664 to 15897810 146 QTL peripheral blood cytotoxic T lymphocyte percentage 1
Psat1 19 15905123 to 15925059 19936 - protein coding gene phosphoserine aminotransferase 1
Tssr158470 19 15920179 to 15920182 3 - TSS region transcription start site region 158470
Tssr155376 19 15923690 to 15923696 6 + TSS region transcription start site region 155376
Cpgi10649 19 15924203 to 15925447 1244 CpG island CpG island 10649
Tssr158471 19 15924560 to 15924569 9 - TSS region transcription start site region 158471
Tssr158472 19 15924928 to 15925015 87 - TSS region transcription start site region 158472
Gm3329 19 15943610 to 15944165 555 + pseudogene predicted gene 3329
Cep78 19 15955774 to 15984989 29215 - protein coding gene centrosomal protein 78
Tssr158473 19 15959201 to 15959204 3 - TSS region transcription start site region 158473
Tssr158474 19 15962522 to 15962534 12 - TSS region transcription start site region 158474
Cpgi10650 19 15984347 to 15985261 914 CpG island CpG island 10650
Tssr158475 19 15984945 to 15984962 17 - TSS region transcription start site region 158475
Tssr158476 19 15984970 to 15985018 48 - TSS region transcription start site region 158476
Tssr155377 19 15985051 to 15985105 54 + TSS region transcription start site region 155377
C130060C02Rik 19 15985090 to 16010912 25822 + lincRNA gene RIKEN cDNA C130060C02 gene
Tssr155378 19 16025409 to 16025439 30 + TSS region transcription start site region 155378
Rpl37-ps1 19 16025498 to 16025762 264 + pseudogene ribosomal protein 37, pseudogene 1
Tssr158477 19 16036095 to 16036118 23 - TSS region transcription start site region 158477
Tssr158478 19 16060045 to 16060052 7 - TSS region transcription start site region 158478
Gm32026 19 16064113 to 16090591 26478 + lncRNA gene predicted gene, 32026