Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:10623001-10733020

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57 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ddb1 19 10605625 to 10629813 24188 + protein coding gene damage specific DNA binding protein 1
Tssr155078 19 10629306 to 10629326 20 + TSS region transcription start site region 155078
Cpgi10616 19 10634172 to 10634693 521 CpG island CpG island 10616
Tssr155079 19 10634223 to 10634245 22 + TSS region transcription start site region 155079
Vwce 19 10634233 to 10665210 30977 + protein coding gene von Willebrand factor C and EGF domains
Tssr155080 19 10634300 to 10634312 12 + TSS region transcription start site region 155080
Tssr155081 19 10634313 to 10634324 11 + TSS region transcription start site region 155081
Cpgi10617 19 10634977 to 10635359 382 CpG island CpG island 10617
4930524O05Rik 19 10645694 to 10648053 2359 - lncRNA gene RIKEN cDNA 4930524O05 gene
Tssr155082 19 10648226 to 10648233 7 + TSS region transcription start site region 155082
Tssr158208 19 10667610 to 10667617 7 - TSS region transcription start site region 158208
Pga5 19 10668957 to 10678071 9114 - protein coding gene pepsinogen 5, group I
Tssr158209 19 10668997 to 10669006 9 - TSS region transcription start site region 158209
Tssr155083 19 10669351 to 10669380 29 + TSS region transcription start site region 155083
Tssr158210 19 10669450 to 10669459 9 - TSS region transcription start site region 158210
Tssr158211 19 10669586 to 10669612 26 - TSS region transcription start site region 158211
Tssr158212 19 10671858 to 10671871 13 - TSS region transcription start site region 158212
Tssr158213 19 10673667 to 10673681 14 - TSS region transcription start site region 158213
Tssr158214 19 10673733 to 10673745 12 - TSS region transcription start site region 158214
Tssr158215 19 10674901 to 10674930 29 - TSS region transcription start site region 158215
Tssr155084 19 10675040 to 10675051 11 + TSS region transcription start site region 155084
Tssr158216 19 10675073 to 10675080 7 - TSS region transcription start site region 158216
Tssr155085 19 10675084 to 10675092 8 + TSS region transcription start site region 155085
Tssr158217 19 10675101 to 10675108 7 - TSS region transcription start site region 158217
Tssr158218 19 10675119 to 10675158 39 - TSS region transcription start site region 158218
Tssr158219 19 10676430 to 10676438 8 - TSS region transcription start site region 158219
Tssr158220 19 10676663 to 10676670 7 - TSS region transcription start site region 158220
Tssr158221 19 10676680 to 10676727 47 - TSS region transcription start site region 158221
Tssr158222 19 10676777 to 10676832 55 - TSS region transcription start site region 158222
Tssr158223 19 10677246 to 10677250 4 - TSS region transcription start site region 158223
Tssr158224 19 10678001 to 10678020 19 - TSS region transcription start site region 158224
Tssr158225 19 10678027 to 10678038 11 - TSS region transcription start site region 158225
2210404E10Rik 19 10684793 to 10685558 765 + lincRNA gene RIKEN cDNA 2210404E10 gene
Tssr158226 19 10685175 to 10685209 34 - TSS region transcription start site region 158226
Cpgi10618 19 10688394 to 10689515 1121 CpG island CpG island 10618
Tssr155086 19 10688724 to 10688740 16 + TSS region transcription start site region 155086
Tssr155087 19 10688744 to 10688818 74 + TSS region transcription start site region 155087
Vps37c 19 10688815 to 10714419 25604 + protein coding gene vacuolar protein sorting 37C
Tssr155088 19 10688918 to 10688959 41 + TSS region transcription start site region 155088
Tssr155089 19 10689228 to 10689243 15 + TSS region transcription start site region 155089
Tssr155090 19 10689256 to 10689279 23 + TSS region transcription start site region 155090
Tssr155091 19 10698530 to 10698565 35 + TSS region transcription start site region 155091
Tssr155092 19 10699336 to 10699349 13 + TSS region transcription start site region 155092
Tssr155093 19 10699365 to 10699376 11 + TSS region transcription start site region 155093
Tssr155094 19 10699379 to 10699394 15 + TSS region transcription start site region 155094
D19Mit126 19 10706389 to 10706508 119 DNA segment DNA Segment, Chr 19, Massachusetts Institute of Technology 126
Tssr155095 19 10712924 to 10712944 20 + TSS region transcription start site region 155095
Tssr155096 19 10712955 to 10712968 13 + TSS region transcription start site region 155096
Tssr155097 19 10713029 to 10713043 14 + TSS region transcription start site region 155097
Cd5 19 10718143 to 10738974 20831 - protein coding gene CD5 antigen
Tssr158227 19 10719122 to 10719126 4 - TSS region transcription start site region 158227
Tssr158228 19 10719418 to 10719430 12 - TSS region transcription start site region 158228
Cpgi10619 19 10723213 to 10723386 173 CpG island CpG island 10619
Tssr158229 19 10725301 to 10725311 10 - TSS region transcription start site region 158229
Tssr158230 19 10726293 to 10726297 4 - TSS region transcription start site region 158230
Tssr155098 19 10732116 to 10732131 15 + TSS region transcription start site region 155098
Tssr155099 19 10732314 to 10732325 11 + TSS region transcription start site region 155099